BioMart User and Developer Support

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Support list for the BioMart project. BioMart is a query-oriented data management system. BioMart is a part of the Generic Model Organism Database (GMOD) project.

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Topics (1058)
Replies Last Post Views
[biomart-users] "file descriptors" problem on RedHat 7 by zhilianghu
0
by zhilianghu
[biomart-users] Fehler in value[[3L]](cond) : by 'Bernard Thienpont' ...
4
by Thomas Maurel
[biomart-users] Biomart server almost continuously down? by Francesco Mazzarotto
53
by peer.wuensche
[biomart-users] Error Displaying Data by Ida Ieda
1
by Arek Kasprzyk
[biomart-users] JVM setting for jetty & biomart 0.9 by joe carlson
0
by joe carlson
[biomart-users] Can't add source to MartConfigurator.sh by Ida Ieda
1
by Arek Kasprzyk
[biomart-users] Help in configuring a 0.9 BioMart for sequence retrieval by joe carlson
10
by Arek Kasprzyk
[biomart-users] "Incorrect BioMart name" when trying to connect to current Ensembl by Gil Hornung
4
by Gil Hornung
[biomart-users] BioMart::Exception::Usage: Requests for flank sequence... by Pedro Barros
10
by ovidiu iancu
[biomart-users] how do you get the search to work in BioMart v0.9 by Naveen Luke
2
by Arek Kasprzyk
[biomart-users] help with search and filter in Biomart 0.9 by Naveen Luke
1
by Arek Kasprzyk
[biomart-users] How to set environment on linux and use martconfigurator.sh by Ida Ieda
1
by Arek Kasprzyk
[biomart-users] Load a Chado database into BioMart 0.9 by Justine Dardaillon
5
by Arek Kasprzyk
[biomart-users] extra content at the end of document, biomaRt down? by Anthony Colombo
1
by Thomas Maurel
[biomart-users] unable to open service 'biomart' by afiqah
1
by afiqah
[biomart-users] biomaRt error : Extra Content at the end of document by Anthony Colombo
0
by Anthony Colombo
[biomart-users] create database using biomart by Mohd Amin Azuwar
6
by Arek Kasprzyk
[biomart-users] property 'split' of undefined by Mohd Amin Azuwar
1
by Arek Kasprzyk
[biomart-users] helps needed to interprate compile error by zhilianghu
1
by Arek Kasprzyk
[biomart-users] I Can't retrieve the 5'upstream regions of specific transcript Biomart Perl. But can retrieve 5'UTR by Livingstone Fultang
7
by Thomas Maurel
[biomart-users] Issue Accessing Phytozome BioMart through R by David Gemperline
4
by David Gemperline
[biomart-users] how to rebuild the attributes and filters after the server abortion by liquankou1987
2
by liquankou1987
[biomart-users] gene symbol to GO terms by Dawn Yu
2
by Dawn Yu
[biomart-users] How to implement this function in Biomart version 0.9 by liquankou1987
4
by liquankou1987
[biomart-users] How to implement this function in Biomart version 0.9 by liquankou1987
0
by liquankou1987
[biomart-users] Error: Expectation Failed. Converting human refseq genes to mouse ensembl ENSMG by Darya Vanichkina
2
by Darya Vanichkina
[biomart-users] Ensembl release 84 is out! by Thomas Maurel
0
by Thomas Maurel
[biomart-users] pointed marts does not allow "<,>,<=,>=" filters by vladie7
3
by Arek Kasprzyk
[biomart-users] Filters not working correctly on pointed Marts by vladie7
0
by vladie7
[biomart-users] Error in value[[3L]](cond) : Request to BioMart web service failed. Verify if you are still conne by Darya Vanichkina
1
by Amonida Zadissa
[biomart-users] BioMarts web servise failed by Justyna
1
by Thomas Maurel
[biomart-users] Request to BioMart web service failed. Tried multiple marts, can't seem to get it working by Ian Pan
5
by Justyna
[biomart-users] change to virtual schema name for Ensembl Genomes marts by Dan Staines
0
by Dan Staines
[biomart-users] OASIS in Nature Methods by Arek Kasprzyk
0
by Arek Kasprzyk
[biomart-users] Trying to understand some code for configuring a new 0.9 BioMart by joe carlson
4
by Arek Kasprzyk
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