Build test fatal error

classic Classic list List threaded Threaded
3 messages Options
Reply | Threaded
Open this post in threaded view
|

Build test fatal error

Barris, Wes
I just installed GBrowse-2.28.  When running ./Build test I get the following error:

t/03.render.t ............. testdata/conf/languages/POSIX.pm: Permission denied at /usr/local/src/gbrowse/GBrowse-2.28/t/testdata/TemplateCopy.pm line 16.
t/03.render.t ............. Dubious, test returned 13 (wstat 3328, 0xd00)
Failed 150/150 subtests

A simple chmod remedies the problem:

chmod 644 t/testdata/conf/languages/POSIX.pm

--
Wes Barris

This email and any files transmitted with it are confidential and intended solely for the use of the addressee. If you are not the intended addressee, then you have received this email in error and any use, dissemination, forwarding, printing, or copying of this email is strictly prohibited. Please notify us immediately of your unintended receipt by reply and then delete this email and your reply. Cobb-Vantress, Inc. and its subsidiaries and affiliates will not be held liable to any person resulting from the unintended or unauthorized use of any information contained in this email or as a result of any additions or deletions of information originally contained in this email.

------------------------------------------------------------------------------
WhatsUp Gold - Download Free Network Management Software
The most intuitive, comprehensive, and cost-effective network
management toolset available today.  Delivers lowest initial
acquisition cost and overall TCO of any competing solution.
http://p.sf.net/sfu/whatsupgold-sd
_______________________________________________
Gmod-gbrowse mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
Reply | Threaded
Open this post in threaded view
|

Re: Build test fatal error

Keiran Raine
Hi,

The issue described by Wes below is still present in version 2.30.

Regards,

Keiran Raine
Senior Computer Biologist
The Cancer Genome Project
Ext: 7703
[hidden email]





On 28 Apr 2011, at 18:34, Barris, Wes wrote:

> I just installed GBrowse-2.28.  When running ./Build test I get the  
> following error:
>
> t/03.render.t ............. testdata/conf/languages/POSIX.pm:  
> Permission denied at /usr/local/src/gbrowse/GBrowse-2.28/t/testdata/
> TemplateCopy.pm line 16.
> t/03.render.t ............. Dubious, test returned 13 (wstat 3328,  
> 0xd00)
> Failed 150/150 subtests
>
> A simple chmod remedies the problem:
>
> chmod 644 t/testdata/conf/languages/POSIX.pm
>
> --
> Wes Barris
>
> This email and any files transmitted with it are confidential and  
> intended solely for the use of the addressee. If you are not the  
> intended addressee, then you have received this email in error and  
> any use, dissemination, forwarding, printing, or copying of this  
> email is strictly prohibited. Please notify us immediately of your  
> unintended receipt by reply and then delete this email and your  
> reply. Cobb-Vantress, Inc. and its subsidiaries and affiliates will  
> not be held liable to any person resulting from the unintended or  
> unauthorized use of any information contained in this email or as a  
> result of any additions or deletions of information originally  
> contained in this email.
>
> ------------------------------------------------------------------------------
> WhatsUp Gold - Download Free Network Management Software
> The most intuitive, comprehensive, and cost-effective network
> management toolset available today.  Delivers lowest initial
> acquisition cost and overall TCO of any competing solution.
> http://p.sf.net/sfu/whatsupgold-sd
> _______________________________________________
> Gmod-gbrowse mailing list
> [hidden email]
> https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse



--
 The Wellcome Trust Sanger Institute is operated by Genome Research
 Limited, a charity registered in England with number 1021457 and a
 company registered in England with number 2742969, whose registered
 office is 215 Euston Road, London, NW1 2BE.

------------------------------------------------------------------------------
WhatsUp Gold - Download Free Network Management Software
The most intuitive, comprehensive, and cost-effective network
management toolset available today.  Delivers lowest initial
acquisition cost and overall TCO of any competing solution.
http://p.sf.net/sfu/whatsupgold-sd
_______________________________________________
Gmod-gbrowse mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
Reply | Threaded
Open this post in threaded view
|

Re: Build test fatal error

Lincoln Stein
Funny, the bug only appears with certain versions of Perl. It is fixed in 2.31, which I'm uploading now.

Lincoln

On Tue, May 3, 2011 at 11:06 AM, Keiran Raine <[hidden email]> wrote:
Hi,

The issue described by Wes below is still present in version 2.30.

Regards,

Keiran Raine
Senior Computer Biologist
The Cancer Genome Project
Ext: 7703
[hidden email]





On 28 Apr 2011, at 18:34, Barris, Wes wrote:

> I just installed GBrowse-2.28.  When running ./Build test I get the
> following error:
>
> t/03.render.t ............. testdata/conf/languages/POSIX.pm:
> Permission denied at /usr/local/src/gbrowse/GBrowse-2.28/t/testdata/
> TemplateCopy.pm line 16.
> t/03.render.t ............. Dubious, test returned 13 (wstat 3328,
> 0xd00)
> Failed 150/150 subtests
>
> A simple chmod remedies the problem:
>
> chmod 644 t/testdata/conf/languages/POSIX.pm
>
> --
> Wes Barris
>
> This email and any files transmitted with it are confidential and
> intended solely for the use of the addressee. If you are not the
> intended addressee, then you have received this email in error and
> any use, dissemination, forwarding, printing, or copying of this
> email is strictly prohibited. Please notify us immediately of your
> unintended receipt by reply and then delete this email and your
> reply. Cobb-Vantress, Inc. and its subsidiaries and affiliates will
> not be held liable to any person resulting from the unintended or
> unauthorized use of any information contained in this email or as a
> result of any additions or deletions of information originally
> contained in this email.
>
> ------------------------------------------------------------------------------
> WhatsUp Gold - Download Free Network Management Software
> The most intuitive, comprehensive, and cost-effective network
> management toolset available today.  Delivers lowest initial
> acquisition cost and overall TCO of any competing solution.
> http://p.sf.net/sfu/whatsupgold-sd
> _______________________________________________
> Gmod-gbrowse mailing list
> [hidden email]
> https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse



--
 The Wellcome Trust Sanger Institute is operated by Genome Research
 Limited, a charity registered in England with number 1021457 and a
 company registered in England with number 2742969, whose registered
 office is 215 Euston Road, London, NW1 2BE.

------------------------------------------------------------------------------
WhatsUp Gold - Download Free Network Management Software
The most intuitive, comprehensive, and cost-effective network
management toolset available today.  Delivers lowest initial
acquisition cost and overall TCO of any competing solution.
http://p.sf.net/sfu/whatsupgold-sd
_______________________________________________
Gmod-gbrowse mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse



--
Lincoln D. Stein
Director, Informatics and Biocomputing Platform
Ontario Institute for Cancer Research
101 College St., Suite 800
Toronto, ON, Canada M5G0A3
416 673-8514
Assistant: Renata Musa <[hidden email]>

------------------------------------------------------------------------------
WhatsUp Gold - Download Free Network Management Software
The most intuitive, comprehensive, and cost-effective network
management toolset available today.  Delivers lowest initial
acquisition cost and overall TCO of any competing solution.
http://p.sf.net/sfu/whatsupgold-sd
_______________________________________________
Gmod-gbrowse mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse