Ergatis Users

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User support list for the Ergatis bioinformatics workflow management system. Ergatis is a part of the Generic Model Organism Database (GMOD) project. To subscribe to this list, go to Sourceforge.
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Topics (120)
Replies Last Post Views
Bug on create_mothur_unique_seqs_iterator_list.pl by Mariette
2
by Joshua Orvis
RunDistributedCommand and NOSISTRIB by Mariette
3
by Mariette
pipeline freezes in running state whereas no job is running by Gérald Salin
2
by Gérald Salin
Unusual KillWorkflow message by Aaron Gussman
1
by Aaron Gussman
2011 GMOD Spring Training, March 8-12 by Dave Clements, GMOD ...
0
by Dave Clements, GMOD ...
Spontaneous "no drmaa in java.library.path" error? by Aaron Gussman
5
by Aaron Gussman
control-A in Bio::SearchIO blast output description by Aaron Buechlein
1
by Joshua Orvis
Passing SGE (default) options to RunWorkflow? by Aaron Gussman
2
by Aaron Gussman
create_file_iterator_list.pl ignores file extensions if they contain digits? by Aaron Gussman
2
by Aaron Gussman
Ergatis not working anymore, Permission denied error by Schobesberger Richar...
1
by Schobesberger Richar...
Is KillWorkflow supposed to qdel SGE jobs? by Aaron Gussman
2
by Gowthaman Ramasamy
Workflow not detecting Aborted SGE jobs? by Aaron Gussman
5
by Aaron Gussman
Re: Rerun Pipeline unique ID error by Aaron Gussman
2
by Aaron Gussman
pangenome pipeline by Julian Krauskopf
0
by Julian Krauskopf
error parse_evidence by Julian Krauskopf
1
by Joshua Orvis
error in component lipop by Julian Krauskopf
1
by Chris Hemmerich
configure components by Julian Krauskopf
1
by Joshua Orvis
tchar.db within start_site_curation.default by Julian Krauskopf
1
by Chris Hemmerich
wu-blastp (pre_overlap_analysis) by Julian Krauskopf
1
by Joshua Orvis
Strange workflow / ergatis ID problems by Aaron Gussman
17
by Joshua Orvis
hmmpfam.pre_overlap_analysis (prok. pipeline) by Julian Krauskopf
3
by Aaron Buechlein
hmmpfam.pre_overlap_analysis (prok. pipeline) by Julian Krauskopf
0
by Julian Krauskopf
train_for_glimmer3_iteration by Julian Krauskopf
10
by Chris Hemmerich
Setting a local instance of Ergatis by Mariette
4
by Chris Hemmerich
Task finished but it was never started by Schobesberger Richar...
10
by Nicolas Allias
Task finished but it was never started by Schobesberger Richar...
0
by Schobesberger Richar...
Task finished but it was never started by Schobesberger Richar...
0
by Schobesberger Richar...
Bug build_pipeline.cgi by Nicolas Allias
3
by Joshua Orvis
ERgatis on Debian 5 by Julian Krauskopf
0
by Julian Krauskopf
Ergatis-based ISGA now part of GMOD by Joshua Orvis
0
by Joshua Orvis
ERgatis on Debian 5 by Julian Krauskopf
2
by Joshua Orvis
Goals for pipeline reproducibility by Chris Hemmerich
2
by Chris Hemmerich
Ergatis on Ubuntu by Julian Krauskopf
2
by Aaron Gussman
GMOD Europe 2010 Update by Dave Clements, GMOD ...
0
by Dave Clements, GMOD ...
Ergatis on Ubuntu by Julian Krauskopf
0
by Julian Krauskopf
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