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Ergatis

Ergatis is a web-based utility that is used to create, run, and monitor reusable computational analysis pipelines. It contains pre-built components for common bioinformatics analysis tasks. These components can be arranged graphically to form highly-configurable pipelines.  Ergatis is a part of the GMOD Project.

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Topics (140)
Replies Last Post Views Sub Forum
Ergatis Error by Wimalanathan Kokulap...
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by Wimalanathan Kokulap...
Ergatis Users
[Ergatis-devel] Migration to GitHub by Joshua Orvis
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by Joshua Orvis
Ergatis Development
dynamic queue name by Jaysheel Bhavsar
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by Jaysheel Bhavsar
Ergatis Users
workflow setup. by Jaysheel Bhavsar
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by Jaysheel Bhavsar
Ergatis Users
PERL5LIB by Mariette
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by Mariette
Ergatis Users
Error getCommandCount by Mariette
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by Mariette
Ergatis Users
Segmentation fault in start_site_curation by Paul Li
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by Paul Li
Ergatis Users
v2r17b2 by Mariette
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by Mariette
Ergatis Users
Rerun only groups by Celine Noirot
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by Mahurkar, Anup
Ergatis Users
grouping hsps in btab format by Chris Hemmerich
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by Joshua Orvis
Ergatis Users
runDistributedCommand into iterable component. by Celine Noirot
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by Mahurkar, Anup
Ergatis Users
[Ergatis-devel] SGE option into iterable component by Celine Noirot
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by Celine Noirot
Ergatis Development
no tty present error by Mariette
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by Mariette
Ergatis Users
Component error log files by Laure Devlamynck
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by Laure Devlamynck
Ergatis Users
Test version v2r17b2 by Mariette
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by Arze, Cesar
Ergatis Users
Problem with "use GUID" in open_reading_frames.pl by Jason Kwan-2
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by Joshua Orvis
Ergatis Users
[Ergatis-devel] patches to prokaryotic annotation components by Chris Hemmerich
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by Chris Hemmerich
Ergatis Development
prodigal bsml errors by Aaron Buechlein
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by Aaron Buechlein
Ergatis Users
Automatic Prokaryotic Annotation Pipeline Datasets by Aaron Buechlein
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by Kevin Galens
Ergatis Users
Global variables for pipeline/template? by Jason Kwan-2
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by Jason Kwan-2
Ergatis Users
Error While Using SGE by Saneesh_SciGenom
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by Joshua Orvis
Ergatis Users
Pipeline stuck at the tRNAscan step by gary_xie
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by Roxanne
Ergatis Users
#SGE_DIRECTIVE location by Aaron Buechlein
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by Aaron Buechlein
Ergatis Users
ncbi blast+ component by Aaron Buechlein
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by Aaron Buechlein
Ergatis Users
\u0001 characters and blast2bsml.pl by Aaron Buechlein
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by Aaron Buechlein
Ergatis Users
[Ergatis-devel] question about changing repeatmasker by Chris Hemmerich
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by Chris Hemmerich
Ergatis Development
question about pipeline output by Roxanne
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by Chris Hemmerich
Ergatis Users
[Ergatis-announce] Ergatis Release: ergatis-v2r16 by Galens, Kevin
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by Galens, Kevin
Ergatis Announcements
Problem with promote_gene_prediction.pl? by Roxanne
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by Roxanne
Ergatis Users
problems opening http://myserver/ergatis by stacy xu
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by Joshua Orvis
Ergatis Users
[Ergatis-devel] Ergatis Release: ergatis-v2r16 by Kevin Galens
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by Joshua Orvis
Ergatis Development
[Ergatis-devel] New Ergatis Release: ergatis-v2r16 by Galens, Kevin
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by Galens, Kevin
Ergatis Development
Question about re-run of pipeline by Roxanne
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by Jason Kwan-2
Ergatis Users
Undefined subroutine &main::get_perl_bins called at Makefile.PL line 130. by Hazard, E. Starr
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by Joshua Orvis
Ergatis Users
Question about cluster jobs by Roxanne
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by Mahurkar, Anup
Ergatis Users
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