Ergatis

Ergatis is a web-based utility that is used to create, run, and monitor reusable computational analysis pipelines. It contains pre-built components for common bioinformatics analysis tasks. These components can be arranged graphically to form highly-configurable pipelines.  Ergatis is a part of the GMOD Project.

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Topics (140)
Replies Last Post Views Sub Forum
March 2011 GMOD Meeting early registration closes this Friday by Dave Clements
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by Dave Clements
Ergatis Users
RunWorkflow not identifying Aborted SGE jobs? by Aaron Gussman
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by Aaron Gussman
Ergatis Users
concatenate_files input by Nicolas Allias
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by Nicolas Allias
Ergatis Users
[Ergatis-devel] GMOD Satellite Meetings, March 7, NESCent, Durham, NC by Dave Clements
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by Dave Clements
Ergatis Development
GMOD Satellite Meetings, March 7, NESCent, Durham, NC by Dave Clements
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by Dave Clements
Ergatis Users
[Ergatis-devel] March 2011 GMOD Meeting Registration is now open by Dave Clements
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by Dave Clements
Ergatis Development
March 2011 GMOD Meeting Registration is now open by Dave Clements
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by Dave Clements
Ergatis Users
Saved pipeline template that includes another pipeline template? by Aaron Gussman
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by Kevin Galens
Ergatis Users
ergatis and gbrowse2 by Mariette
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by Joshua Orvis
Ergatis Users
Re: pipeline freezes in running state whereas no job is running by Schobesberger Richar...
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by Mahurkar, Anup
Ergatis Users
New components by Mariette
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by Joshua Orvis
Ergatis Users
create_file_iterator_list by Mariette
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by Mariette
Ergatis Users
question about tigr_roles_keywords.txt by Chris Hemmerich
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by Joshua Orvis
Ergatis Users
Bug on create_mothur_unique_seqs_iterator_list.pl by Mariette
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by Joshua Orvis
Ergatis Users
RunDistributedCommand and NOSISTRIB by Mariette
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by Mariette
Ergatis Users
[Ergatis-devel] GMOD Spring Training Application Deadline January 7 by Dave Clements, GMOD ...
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by Dave Clements, GMOD ...
Ergatis Development
pipeline freezes in running state whereas no job is running by Gérald Salin
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by Gérald Salin
Ergatis Users
Unusual KillWorkflow message by Aaron Gussman
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by Aaron Gussman
Ergatis Users
[Ergatis-devel] 2011 GMOD Spring Training, March 8-12 by Dave Clements, GMOD ...
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by Dave Clements, GMOD ...
Ergatis Development
2011 GMOD Spring Training, March 8-12 by Dave Clements, GMOD ...
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by Dave Clements, GMOD ...
Ergatis Users
Spontaneous "no drmaa in java.library.path" error? by Aaron Gussman
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by Aaron Gussman
Ergatis Users
control-A in Bio::SearchIO blast output description by Aaron Buechlein
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by Joshua Orvis
Ergatis Users
Passing SGE (default) options to RunWorkflow? by Aaron Gussman
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by Aaron Gussman
Ergatis Users
create_file_iterator_list.pl ignores file extensions if they contain digits? by Aaron Gussman
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by Aaron Gussman
Ergatis Users
Ergatis not working anymore, Permission denied error by Schobesberger Richar...
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by Schobesberger Richar...
Ergatis Users
Is KillWorkflow supposed to qdel SGE jobs? by Aaron Gussman
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by Gowthaman Ramasamy
Ergatis Users
Workflow not detecting Aborted SGE jobs? by Aaron Gussman
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by Aaron Gussman
Ergatis Users
Re: Rerun Pipeline unique ID error by Aaron Gussman
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by Aaron Gussman
Ergatis Users
pangenome pipeline by Julian Krauskopf
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by Julian Krauskopf
Ergatis Users
error parse_evidence by Julian Krauskopf
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by Joshua Orvis
Ergatis Users
error in component lipop by Julian Krauskopf
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by Chris Hemmerich
Ergatis Users
configure components by Julian Krauskopf
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by Joshua Orvis
Ergatis Users
tchar.db within start_site_curation.default by Julian Krauskopf
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by Chris Hemmerich
Ergatis Users
wu-blastp (pre_overlap_analysis) by Julian Krauskopf
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by Joshua Orvis
Ergatis Users
Strange workflow / ergatis ID problems by Aaron Gussman
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by Joshua Orvis
Ergatis Users
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