FW: [BiO Jobs] Opportunity: FlyBase InterMine/BioMart developer @ Indiana University--Bloomington, IN (US)

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FW: [BiO Jobs] Opportunity: FlyBase InterMine/BioMart developer @ Indiana University--Bloomington, IN (US)

Arek Kasprzyk-2
FW: [BiO Jobs] Opportunity: FlyBase InterMine/BioMart developer @ Indiana University--Bloomington, IN (US)
FYI,
Forwarding on behalf of Dave Clements

a


Arek Kasprzyk
Director, Bioinformatics Operations and Principal Investigator

Ontario Institute for Cancer Research
MaRS Centre, South Tower
101 College Street, Suite 800
Toronto, Ontario, Canada M5G 0A3
            
Tel:                        416-673-8559
Toll-free:             1-866-678-6427
www.oicr.on.ca
 
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------ Forwarded Message
From: Dave Clements <clements@...>
Date: Fri, 3 Sep 2010 01:47:20 -0400
To: Richard Smith <richard@...>, Arek Kasprzyk <arek.kasprzyk@...>
Subject: Fwd: [BiO Jobs] Opportunity: FlyBase InterMine/BioMart developer @ Indiana University--Bloomington, IN (US)


Hi Richard, Arek,

I want to post this to the BioMart and InterMine mailing lists.  Is that appropriate?

Dave C

---------- Forwarded message ----------
From:  <jobs@...>
Date: Wed, Aug 25, 2010 at 2:23 PM
Subject: [BiO Jobs] Opportunity: FlyBase InterMine/BioMart developer @ Indiana University--Bloomington, IN (US)
To: clementsnescent@...


Bioinformatics.Org Career Center
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Opportunity: FlyBase InterMine/BioMart developer @ Indiana University--Bloomington, IN (US)
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BACKGROUND:
FlyBase (http://flybase.org/) is an online database of Drosophila genes and genomes.

RESPONSIBILITIES:
FlyBase is looking for a qualified software engineer to undertake a project to deploy the InterMine and BioMart data management systems. The developer will be responsible for the web and database aspects of these technologies, which will be hosted at the Indiana University FlyBase site in Bloomington, IN. This includes the initial setup and configuration of these two systems, setting up and automating update cycles in sync with the existing FlyBase release cycle, evaluating the capabilities of each, aiding in the integration of these services with existing FlyBase reports and tools, and coordinating these efforts with other model organism databases (MODs). Loading and preprocessing of data for these systems will be performed at the Harvard University FlyBase site so close coordination with developers there will also be required.

REQUIREMENTS:
- BS/MS degree in Biology or related fields
- Other fields acceptable with sufficient biological experience
- 2+ years of software development experience

- Experience with the following technologies:
-- Perl programming
-- Java programming (knowledge of JSP a plus)
-- Linux development environment (system administration skills a plus)
-- MySQL and PostgreSQL databases
-- Apache web server
-- Tomcat Java web application server
-- InterMine and/or BioMart experience a plus

LOCALE:
Department of Biology at Indiana University Bloomington, IN, USA

COMPENSATION:
Salary commensurate with qualifications and experience; full benefits included.

HOW TO APPLY:
To apply send a cover letter, CV/resume, and contact information for 3 individuals willing to serve as a reference, to flybase.jobs <http://flybase.jobs>  [at] gmail.com <http://gmail.com>  using "FlyBase RA" in the subject line or send hard copy to 1001 East Third Street, Bloomington, IN 47405.

POLICY:
Indiana University is an equal opportunity/affirmative action employer.

DEADLINE:
Applications will be accepted until a suitable candidate is identified.

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