Fwd: Error while installing perl prerequisites for JBrowse

classic Classic list List threaded Threaded
2 messages Options
Reply | Threaded
Open this post in threaded view
|

Fwd: Error while installing perl prerequisites for JBrowse

Pubudu Dodangoda
Hi,

I am getting the following errors when the ./setup.sh is run on my ubuntu machine. I followed instructions in http://gmod.org/wiki/JBrowse and https://github.com/GMOD/jbrowse/tree/master 

Attached is the setup.log file. Anyone who can support to troubleshoot this?

Thank you,
Pubudu

--
Pubudu Dodangoda
BSc Engineering(Hon's) Undergraduate
Department of Computer Science Engineering 
University of Moratuwa
<a href="tel:0716053681" value="+94716053681" target="_blank">0716053681 / <a href="tel:0717265234" value="+94717265234" target="_blank">0717265234

setup.log (6K) Download Attachment
Reply | Threaded
Open this post in threaded view
|

Re: Error while installing perl prerequisites for JBrowse

Ian Holmes-2
Hi Pubudu,

Lines like the following suggest a problem with the permissions of ~/.cpanm:
Can't write to cpanm home '/home/pubudud/.cpanm': You should fix it with chown/chmod first.

Try 'sudo chown -R pubudud .cpanm'




On Sat, Apr 30, 2016 at 11:52 PM, Pubudu Dodangoda <[hidden email]> wrote:
Hi,

I am getting the following errors when the ./setup.sh is run on my ubuntu machine. I followed instructions in http://gmod.org/wiki/JBrowse and https://github.com/GMOD/jbrowse/tree/master 

Attached is the setup.log file. Anyone who can support to troubleshoot this?

Thank you,
Pubudu

--
Pubudu Dodangoda
BSc Engineering(Hon's) Undergraduate
Department of Computer Science Engineering 
University of Moratuwa
<a href="tel:0716053681" value="+94716053681" target="_blank">0716053681 / <a href="tel:0717265234" value="+94717265234" target="_blank">0717265234