GBrowse

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GBrowse Genome Browser Mailing list for questions and announcements about using and developing for GBrowse, the Generic Genome Browser, and GBrowse_syn, the Generic Synteny Browser. GBrowse and GBrowse_syn are a part of the Generic Model Organism Database (GMOD) project.

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Topics (2072)
Replies Last Post Views
Blank tracks by Stephen Taylor
26
by Dan Bolser-3
Re: Problem displaying glyph colors by Keiran Raine
0
by Keiran Raine
Problem displaying glyph colors by Bremen Braun
9
by Scott Cain
Need some help - submitting TopoView RNA-seq stuff to GMOD by vstrelet
2
by vstrelet
Is "region segment" a valid configuration option for 2.0? by Dan Bolser-3
0
by Dan Bolser-3
Problem with track rendering time out. Probably related to sub-features? by Dan Bolser-3
4
by Dan Bolser-3
doubts related to gbrowse2 by Aswathy N
1
by Jayaraman, Pushkala
Displaying NGS short reads coverage problem by neil-2
1
by Keiran Raine
remote feature track not working in Gbrowse 2 by dmgood11
3
by Richard Hayes
the problem to show my ChIP-seq data by neil-2
10
by J.M.P. Alves
Question for those using PostGres with Bio::SeqFeature::Store and GBrowse by Keiran Raine
0
by Keiran Raine
Summary Mode - Does not work with DBI::Pg by Keiran Raine
8
by Scott Cain
global directory for track files? by Steve Fischer
3
by Steve Fischer
Track display order by Stephens, Robert (NI...
0
by Stephens, Robert (NI...
Does gbrowse2 really require Ace.pm and MOBY/Client/Central.pm by Wes Barris
1
by Robert Buels
gbrowse2 displaying blank page - Can't call method seq_id on an undefined value" in Render.pm line 3650 by yomimono
13
by Chevreux, Bastien
Tutorial database problem by neil-2
3
by neil-2
where are the "Name" attributes in DB after using bp_seqfeature_load by wizi
1
by wizi
Installing /usr/bin/gbrowse_set_admin_passwd.pl so slow by neil-2
1
by Scott Cain
GBrowse and GWT by Gregory Dougherty
6
by Scott Cain
ESTs overlaping problem by Mariano Latorre
1
by Scott Cain
(no subject) by Vaughan, Samuel
2
by Lincoln Stein
Error when using bp_bulk_load_gff.pl by wizi
11
by Scott Cain
can't write to tmp/images directory by okeeffe
13
by donghe
gbrowse_details script by Alaguraj Veluchamy
3
by Scott Cain
Gbrowse rendertime with big sam/bam data by Christian Schröder
4
by Lincoln Stein
region tracks - question and possible bug by Keiran Raine
2
by Keiran Raine
Probable bug: GBrowse 2.13 / SequenceDumper(?) duplicates features and produces wrong results by Chevreux, Bastien
0
by Chevreux, Bastien
apache error log by neil-2
2
by neil-2
GBrowse2 configure problem by neil-2
1
by Noah Fahlgren
Unpredictable black/orange "transparencies" in some tracks by Luis Quintales
1
by Dave Clements, GMOD ...
GBrowse install problem by neil-2
2
by Dave Clements, GMOD ...
representation of gff3 files when one feature maps into to positions by Jayaraman, Pushkala
5
by Jayaraman, Pushkala
[bug 3120] Bio::DB::SeqFeature::Store::DBI::SQLite + bp_seqfeature_gff3.PLS = unhappy? by Jay Hannah
0
by Jay Hannah
mysql adaptor issue on gbrowse2 by Kai Xia
8
by Lincoln Stein
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