GWAS data/viz in a mine?

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GWAS data/viz in a mine?

Sam Hokin-3
Does anyone present a representation of GWAS data in their mine? Or know of one? I thought I'd seen one somewhere, but nothing's
coming up with a Google search.
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Fwd: GWAS data/viz in a mine?

Himanshu kumar

---------- Forwarded message ----------
From: Himanshu kumar <[hidden email]>
Date: Sat, Mar 31, 2018 at 9:30 AM
Subject: Re: [InterMine Dev] GWAS data/viz in a mine?
To: Sam Hokin <[hidden email]>


<img width="0" height="0" class="m_6942319919231206284mailtrack-img" alt="" style="display:flex" src="data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7">
Hello Sam Hokin, 

I don't know if I understood you correctly, But if would you like to search for GWAS term across multiple mines(to check if there is a representation of GWAS in any mine) you could have a look here (https://himanshukumar660.github.io/Cross-InterMine-Search-Tool/result.html?sQuery=GWAS+). 

Note: The above project is still under development, so features are not available currently. Currently, it performs a quick search across all the mines selected.

Thanks,



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On Sat, Mar 31, 2018 at 3:00 AM, Sam Hokin <[hidden email]> wrote:
Does anyone present a representation of GWAS data in their mine? Or know of one? I thought I'd seen one somewhere, but nothing's coming up with a Google search.
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--
Himanshu Kumar
B. Tech (Penultimate year
Computer Science and Engineering
Ph. no. - (+91) 9476001014
National Institute of Technology, Durgapur
Mahatma Gandhi Avenue,
Durgapur, West Bengal- 713209
India



--
Himanshu Kumar
B. Tech (Penultimate year
Computer Science and Engineering
Ph. no. - (+91) 9476001014
National Institute of Technology, Durgapur
Mahatma Gandhi Avenue,
Durgapur, West Bengal- 713209
India
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Re: GWAS data/viz in a mine?

Sam Hokin-3
In reply to this post by Sam Hokin-3
No, I meant something more like a Manhattan plot of segregation significance, with, say, QTL bands overlaid. More on the
visualization end. But also data from a PathQuery. I'm not concerned about searching for anything, I'm wondering where GWAS data is
and how it is visualized.

On 03/30/2018 10:00 PM, Himanshu kumar wrote:

> Hello Sam Hokin,
>
> I don't know if I understood you correctly, But if would you like to search for GWAS term across multiple mines(to check if there is
> a representation of GWAS in any mine) you could have a look here
> (https://himanshukumar660.github.io/Cross-InterMine-Search-Tool/result.html?sQuery=GWAS+).
>
> Note: The above project is still under development, so features are not available currently. Currently, it performs a quick search
> across all the mines selected.
>
> Thanks,
>
> <https://mailtrack.io/> Sent with Mailtrack
> <https://mailtrack.io?utm_source=gmail&utm_medium=signature&utm_campaign=signaturevirality&>
>
> On Sat, Mar 31, 2018 at 3:00 AM, Sam Hokin <[hidden email] <mailto:[hidden email]>> wrote:
>
>     Does anyone present a representation of GWAS data in their mine? Or know of one? I thought I'd seen one somewhere, but nothing's
>     coming up with a Google search.
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