Galaxy Development

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Galaxy Project This list is for discussion among developers and deployers of Galaxy, an analysis and data integration framework for biological data. Anyone running a local installation of Galaxy is also encouraged to join. Typical discussions regard features, bugs, and new ideas. Commits to the central source repository as well as announcements from the Galaxy Team are also sent to this list. Galaxy is a part of the Generic Model Organism Database (GMOD) project.

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Topics (7148)
Replies Last Post Views
one dataset won't import by Langhorst, Brad
0
by Langhorst, Brad
links to UCSC Genome Browser dev server by Dave Clements-3
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by Dave Clements-3
Native LDAP auth to AD by RSD
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by RSD
Gateways 2018: Early-bird ENDS Aug. 6; Poster Session EXTENSION to Aug. 15 by Katherine Lawrence
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by Katherine Lawrence
Hierarchical upload API documentation and example by Lance Parsons
1
by E. Rasche
Local Galaxy Instance Error: "enable third-party cookies" they're enabled already! by David Halvorsen
0
by David Halvorsen
Installing Tool Dependencies by Tom Misilo
6
by Gudrun Mareike Amedi...
Expose Command Line in Galaxy by Matthias Enders
13
by Matthias Enders
Conda problems: Failed to activate conda environment by Van Wageningen, GERH...
12
by Van Wageningen, GERH...
AMD EPYC and Galaxy by Van Wageningen, GERH...
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by Van Wageningen, GERH...
Error with SAMTools Mpileup v1.2 by Aarthi Mohan-2
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by Aarthi Mohan-2
uWSGI threading issue by Durdevic, Marija
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by Durdevic, Marija
From Paste to uWSGI by Jochen Bick
3
by Jochen Bick
Strange error in galaxy by Evan
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by Evan
REST API api/tools by Dmitry
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by Dmitry
jobs not running with galaxy.yml by Matthias Bernt
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by Matthias Bernt
Unable to install tools from toolshed/mercurial issue in release_18.05 instance by Peter Briggs
2
by Peter Briggs
MySQL errors and warnings with a fresh install of Galaxy 18-05 by FredBGA
4
by FredBGA
instance management inspiration by Matthias Bernt
3
by Björn Grüning-3
pbs/torque jobs by Briand, Sheldon (NRC...
10
by Marius van den Beek
Conflicting conda dependencies for Galaxy tool by Peter Briggs
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by Peter Briggs
python: error while loading shared libraries by Floreline TOUCHARD
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by Floreline TOUCHARD
job deletion by Matthias Bernt
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by Matthias Bernt
galaxy upgrade 18.05 problem by Matthias Bernt
1
by Martin Čech
Permanently deleting users from a Galaxy instance by Peter Briggs
2
by Peter Briggs
problem with Visualization 'Scatterplot' in 18.05 by Hans-Rudolf Hotz
4
by Hans-Rudolf Hotz
Uploads via Nginx proxy fail after upgrade to current release by Hans-Georg Sommer
2
by Ignacio EGUINOA
Job Script Integrity by John Letaw
1
by John Chilton-4
tabular data display by Matthias Bernt
4
by Matthias Bernt
argparse -> tool xml advice by Matthias Bernt
8
by Matthias Bernt
Conda problem by David Lee
3
by Peter Cock
Workflow renaming problem for tool with multiple outputs (Galaxy version 17.09) by Previti
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by Previti
Purging "Monitor installing repositories" by Previti
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by Previti
Text file busy and conda by John Letaw
2
by John Letaw
Trackster ownership issue by Previti
5
by Dannon Baker-2
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