Galaxy Development

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Galaxy Project This list is for discussion among developers and deployers of Galaxy, an analysis and data integration framework for biological data. Anyone running a local installation of Galaxy is also encouraged to join. Typical discussions regard features, bugs, and new ideas. Commits to the central source repository as well as announcements from the Galaxy Team are also sent to this list. Galaxy is a part of the Generic Model Organism Database (GMOD) project.

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Topics (7250)
Replies Last Post Views
Errors running jobs in Galaxy 16.01 with slurm-drmaa 1.1.0 by pdblood
3
by pdblood
pbs-python issues by Sandra Maksimovic
7
by Galaxy Development m...
Job going in Melbourne for Galaxy Australia by Simon Gladman-2
0
by Simon Gladman-2
set up an asynchronous data source in galaxy by Galaxy Development m...
2
by Galaxy Development m...
upload issues with gff3.gz files. by Galaxy Development m...
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by Galaxy Development m...
Gateways 2019 (San Diego): Register by Sept. 9 -- Keynote by James Taylor of Galaxy! by Katherine Lawrence
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by Katherine Lawrence
King Skrupellos hack by Gillevet Patrick
3
by Daniel Blankenberg-2
hudge size of _cleared_contents dir in job_working_directory by Franck Giacomoni
0
by Franck Giacomoni
Error when installing from toolshed by Nancy Ide-2
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by Nancy Ide-2
Installing SOAPdenovo tools by Peter Briggs
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by Peter Briggs
conda not installing deps. by Jochen Bick
4
by Gildas Le Corguillé
Memory limit for a Travis CI build by Jin Li
2
by Jin Li
Installing a database on local instance Galaxy by goutham sarovaram
1
by Björn Grüning-3
How to resolve the dependency of self-compiled C++ programs when publishing a tool? by Jin Li
10
by Galaxy Development m...
trouble running the new galaxy instance by Jochen Bick
2
by Jochen Bick
backing up old histories by Gillevet Patrick
0
by Gillevet Patrick
2 accounts by mistake by Galaxy Development m...
1
by Jennifer Hillman-Jac...
Still problems running ML tools from toolshed by Nancy Ide-2
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by Nancy Ide-2
Bismark - Bug in Bismark Pretty Report ? by Previti
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by Previti
Error during tool installation: "inotify instance limit reached" by Previti
2
by Previti
Error by Nancy Ide-2
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by Nancy Ide-2
Report an error by Fernanda Manaia Dema...
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by Fernanda Manaia Dema...
Can't upload xlsx data from Firefox Quantum? by Steven Shen
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by Steven Shen
Error by Nancy Ide-2
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by Nancy Ide-2
New to supporting Galaxy (local deployment) seeking help related to upload problem and log file locations by zemay
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by zemay
set metadata resubmission by Matthias Bernt
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by Matthias Bernt
Workflow assigning columns on output causes "Uncaught exception in exposed API method" by Peter Briggs
2
by Peter Briggs
samtools_slice_bam/2.0.1 no options available by Eric Kuyt-2
3
by Martin Čech
new datasets appear in database/files/000/ by Jochen Bick
2
by Dannon Baker-2
Re: galaxy-dev Digest, Vol 155, Issue 3 by Matthias Bernt
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by Jochen Bick
URL prefix doesn't work properly in Galaxy v18.09 by Ping Luo
3
by Ping Luo
Tagging collection datasets from file with hashtags by Charles Girardot
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by Charles Girardot
Share Docker Volumes when integrating Containers in Galaxy by Schäfer, Richard
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by Galaxy Development m...
Galaxy jobs on Apache Mesos with chronos.py runner by Pietro Mandreoli
1
by John Chilton-4
Random failed job after update 18.05 -> 19.01 by Edouard Hirchaud
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by Edouard Hirchaud
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