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Galaxy Development

This forum is an archive for the mailing list galaxy-dev@lists.galaxyproject.org (more options) Messages posted here will be sent to this mailing list.
Galaxy Project This list is for discussion among developers and deployers of Galaxy, an analysis and data integration framework for biological data. Anyone running a local installation of Galaxy is also encouraged to join. Typical discussions regard features, bugs, and new ideas. Commits to the central source repository as well as announcements from the Galaxy Team are also sent to this list. Galaxy is a part of the Generic Model Organism Database (GMOD) project.

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Topics (6892)
Replies Last Post Views
Dataset Cleanup by McCully, Dwayne (NIH...
3
by Dannon Baker-2
January 2017 News of the Galaxy: Register now for GAMe 2017! by Dave Clements-3
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by Dave Clements-3
wrapper for tool with multiple outputs by Bick Jochen
4
by Bick Jochen
installation error on venv dependencies.xml by Linda Bakker
0
by Linda Bakker
GalaxyAdmins Online Meetup 15 December by Dave Clements-3
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by Dave Clements-3
Dump SQlite to mySQL by evan clark
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by evan clark
psycopg2 module and SSL connection to postgresql by Floreline TOUCHARD
1
by John Chilton-4
GIE security implications by Tamir,Ido
1
by Björn Grüning-3
Groovy tool for galaxy by Anshul Tak
1
by Suderman Keith
Job launching slowed down by conda auto-install by Tiago Macedo
1
by Marius van den Beek
tmp file under database/tmp get regenerated after restarting Galaxy by Mark Xiao
1
by Mark Xiao
Tools pick up Python modules from Galaxy core rather than installed tool dependencies by Peter Briggs
3
by Peter Briggs
Connection to mariaDB generates tables, but does not migrate information by evan clark
2
by Hans-Rudolf Hotz
Installation of packages failing by James Mullan
6
by Peter Briggs
Speedup Galaxy by Bick Jochen
5
by Nate Coraor (nate@bx...
Galaxy Security Vulnerability - Arbitrary code execution by Nate Coraor (nate@bx...
3
by Daniel Blankenberg
Announcing the October 2016 (v16.10) Galaxy Release by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
devteam dropped support for installing tool dependencies from toolshed? by Peter Briggs
3
by Björn Grüning-3
New datatypes with code dependencies by Cristel Thomas
2
by Cristel Thomas
multiple datatypes input in 16.07 by Cristel Thomas
11
by Aysam Guerler
Testing workflows by Eric Rasche-3
1
by Jelle Scholtalbers
Addind new datatype - best practice by Floreline TOUCHARD
1
by Björn Grüning-3
Broken logo 'src' in masthead for Galaxy 16.07 served from subdirectory by Peter Briggs
2
by Peter Briggs
Error when "Export History to File" by D K
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by D K
December Galaxy News: New web site, GAMe deadline extended by Dave Clements-3
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by Dave Clements-3
Galaxy Orione server name by Blaise Pascal Bougno...
2
by Gianmauro Cuccuru
ToolShed devteam tools error by Yip, Miu ki
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by Yip, Miu ki
Galaxy 16.07: datasets don't update to yellow "running" state with novel job runner by Peter Briggs
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by Peter Briggs
Datasets incorrectly flagged as deleted by Lance Parsons
5
by Lance Parsons
Unable to upload bam files as links to my local galaxy instance - please help! by Konstantinos Vouteta...
1
by Peter Cock
Jobs don't run for one user by Langhorst, Brad
5
by Nate Coraor (nate@bx...
Pulsar: issue configuring to use shared filesystem rather than staging data by pdblood
2
by pdblood
Datasets no longer automatically update to yellow "running" state using novel job runner by Peter Briggs
0
by Peter Briggs
htseq_count version 0.6.1p1 dated (2016-09-21) and (2015-07-28) by Raphenya, Amogelang
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by Raphenya, Amogelang
History is not accessible by user by Maximilian Friedersd...
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by Hans-Rudolf Hotz
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