Galaxy Development

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Galaxy Project This list is for discussion among developers and deployers of Galaxy, an analysis and data integration framework for biological data. Anyone running a local installation of Galaxy is also encouraged to join. Typical discussions regard features, bugs, and new ideas. Commits to the central source repository as well as announcements from the Galaxy Team are also sent to this list. Galaxy is a part of the Generic Model Organism Database (GMOD) project.

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Topics (7052)
Replies Last Post Views
Toolshed partial installation ? deeptools error by julie dubois
7
by julie dubois
data_manager_gatk_picard_index_builder "no space left" by laurent.fournier
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by laurent.fournier
Pause queued jobs by Lachlan Musicman
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by Lachlan Musicman
show tool errors admin interface by Christopher Previti
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by Christopher Previti
Docker Galaxy & HISAT2: ValueError: Parameter index requires a value, but has no legal values defined. by Peter van Heusden
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by Peter van Heusden
Re: upload file format is data - type not recognized in, galaxy by Evan
1
by Pavel Fibich
resubmission on out of memory by Matthias Bernt
3
by Marius van den Beek
Changing $galaxy_lib Variable by evan clark
0
by evan clark
Cron Job Tool by Mohamed Kassam
1
by John Chilton-4
Galaxy server requires a restart to activate tools by RMSe17
4
by RMSe17
Galaxy cloud azur by Mohamed Kassam
1
by Enis Afgan
upload file format is data - type not recognized in galaxy by Pavel Fibich
5
by Pavel Fibich
Question about "reference_fasta_filename" for "Map with BWA" (existing tool) by Qian, Yingzhi
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by Qian, Yingzhi
Re: Displaying tool select list according to user by Peter Cock
10
by Mohamed Kassam
galaxy behind firewall by Matthias Bernt
3
by Daniel Blankenberg-2
Deprecation of Sample Tracking and External Services by Aysam Guerler
0
by Aysam Guerler
Dependencies issue with tool installation via ephemeris by RMSe17
6
by Björn Grüning-3
tool runtimes by Matthias Bernt
0
by Matthias Bernt
installation/conda problems by Matthias Bernt
3
by Matthias Bernt
Issues with new galaxy and galaxy_lib by Evan
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by Evan
unipept visualization by Matthias Bernt
7
by Nicola Soranzo-2
conda problem by Matthias Bernt
2
by Matthias Bernt
[hxr@hx42.org: [SECURITY] 2017-08 security patch. Update now!] by E. Rasche
0
by E. Rasche
Error while building reference genome index by laurent.fournier
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by laurent.fournier
Re: galaxy-dev Digest, Vol 134, Issue 19 by Matthias Bernt
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by Matthias Bernt
Error with run as real user, unable to read file by Evan
0
by Evan
Firefox drag and drop not working by Bick Jochen
3
by Aysam Guerler
job_working_directory: no subdirectories created by D K
0
by D K
toolshed and testtoolshed by Matthias Bernt
2
by Björn Grüning-3
Conda dependency install problems for DESeq2 tool by Peter Briggs
2
by Peter Briggs
Groovy tool for galaxy by Anshul Tak
4
by Suderman Keith
Image in tool XML "help" section only renders when installed from toolshed? by Peter Briggs
6
by Peter Briggs
User Preferences not rendering view, insetting galaxy UI by evan clark
2
by Aysam Guerler
Python Communication by evan clark
2
by evan clark
Gateways 2017: Early-bird registration open until Sept. 1; register by Th., Oct. 12 by Katherine Lawrence
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by Katherine Lawrence
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