Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9493)
Replies Last Post Views Sub Forum
Galaxy @ ISMB/ECCB/BOSC 2017: Talks, posters, dinner, BoF, and tutorial by Dave Clements-3
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by Dave Clements-3
Galaxy Development
internal server error when creating or editing a workflow by Nadia Goué
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by Nadia Goué
Galaxy Development
How to install Charts in command line ? by Steven Shen
4
by Steven Shen
Galaxy Development
numpy problem by Matthias Bernt
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by Matthias Bernt
Galaxy Development
Adding a visualization plugin to a galaxy local toolshed by Lisa Perus
2
by Lisa Perus
Galaxy Development
Bugfix - Summary Statistics Script - Python incompatibility by Christopher Previti
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by Christopher Previti
Galaxy Development
inconsistent state set for workflow submissions [using bioblend] by Aarthi Mohan
1
by John Chilton-4
Galaxy Development
Cleaning up old exported histories by Lance Parsons
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by Lance Parsons
Galaxy Development
problem with column options by fabien gogé
1
by Aysam Guerler
Galaxy Development
Issue with SLURM-DRMAA by Dawes, Gwen
2
by Nate Coraor (nate@bx...
Galaxy Development
tool and planemo problems by Matthias Bernt
6
by Peter Cock
Galaxy Development
Issues with "bamtools split", running jobs don't show up in history (and fail after several hours) by Christopher Previti
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by Christopher Previti
Galaxy Development
Java memory requirements for Picard index? by Christopher Previti
2
by Christopher Previti
Galaxy Development
Shiny in Galaxy by Mohamed Kassam
6
by Hans-Rudolf Hotz
Galaxy Development
any introduce for how Mako and JavaScript work in galaxy? by Steven Shen
3
by Steven Shen
Galaxy Development
Re: Improved DRMAAJobRunner (Peter van Heusden) by Matthias Bernt
4
by Peter van Heusden
Galaxy Development
Fwd: Mismatched Files by Changsu Dong
1
by Dave Bouvier
Galaxy Development
How to use the input freebayes "input_bams" to rename output by Charles Girardot
0
by Charles Girardot
Galaxy Development
ustacks - bad interpreter by David Meltzer
8
by Björn Grüning-3
Galaxy Development
Improved DRMAAJobRunner by Matthias Bernt
1
by Peter van Heusden
Galaxy Development
running tests angainst an existing galaxy instance by Gudrun Amedick
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by Gudrun Amedick
Galaxy Development
pyconfig.h missing by Fiona Mary Roche
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by Fiona Mary Roche
Galaxy Development
"Best practice" for maintaining genome list in Galaxy by Peter van Heusden
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by Peter van Heusden
Galaxy Development
Moving Shared Data Library Folders by D K
1
by Devon Ryan
Galaxy Development
DeepTools installation error by Timo Janßen
9
by Christopher Previti
Galaxy Development
conda problem with R libraries by Bick Jochen
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by Bick Jochen
Galaxy Development
Python modules not found when starting with init system by Maximilian Friedersd...
4
by James Abbott
Galaxy Development
new installation galaxy-17.05 - Uncaught error. by fernandez Edgar
9
by Aysam Guerler
Galaxy Development
Galaxy Dinner @ ISMB/ECCB/BOSC 2017 by Dave Clements-3
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by Dave Clements-3
Galaxy Development
How to FTP files on Dockerized version of Galaxy instance running on DC/OS server? by Md. Rezaul Karim
10
by Devon Ryan
Galaxy Development
dexseq pysam error by Rui Wang
1
by Rui Wang
Galaxy Development
Mac OS X, edgeR installtion by Bongsoo Park-2
0
by Bongsoo Park-2
Galaxy Development
Singularity Container forks ? by Nikos Nikoloutsakos
6
by John Chilton-4
Galaxy Development
Admin Training Poll: Where should Galaxy Admin Training be held next? by Dave Clements-3
1
by Dave Clements-3
Galaxy Development
AD Intergration by John Chen
11
by Chen, John (IT)
Galaxy Development
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