Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9698)
Replies Last Post Views Sub Forum
one dataset won't import by Langhorst, Brad
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by Langhorst, Brad
Galaxy Development
links to UCSC Genome Browser dev server by Dave Clements-3
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by Dave Clements-3
Galaxy Development
Native LDAP auth to AD by RSD
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by RSD
Galaxy Development
Gateways 2018: Early-bird ENDS Aug. 6; Poster Session EXTENSION to Aug. 15 by Katherine Lawrence
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by Katherine Lawrence
Galaxy Development
[galaxy-announce] August Galaxy News: GCC2019, Online GTN CoFest, new pubs, servers, tools... by Dave Clements-3
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by Dave Clements-3
Galaxy Announcements
Hierarchical upload API documentation and example by Lance Parsons
1
by E. Rasche
Galaxy Development
Local Galaxy Instance Error: "enable third-party cookies" they're enabled already! by David Halvorsen
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by David Halvorsen
Galaxy Development
Installing Tool Dependencies by Tom Misilo
6
by Gudrun Mareike Amedi...
Galaxy Development
Expose Command Line in Galaxy by Matthias Enders
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by Matthias Enders
Galaxy Development
Conda problems: Failed to activate conda environment by Van Wageningen, GERH...
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by Van Wageningen, GERH...
Galaxy Development
AMD EPYC and Galaxy by Van Wageningen, GERH...
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by Van Wageningen, GERH...
Galaxy Development
Error with SAMTools Mpileup v1.2 by Aarthi Mohan-2
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by Aarthi Mohan-2
Galaxy Development
uWSGI threading issue by Durdevic, Marija
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by Durdevic, Marija
Galaxy Development
From Paste to uWSGI by Jochen Bick
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by Jochen Bick
Galaxy Development
Strange error in galaxy by Evan
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by Evan
Galaxy Development
REST API api/tools by Dmitry
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by Dmitry
Galaxy Development
jobs not running with galaxy.yml by Matthias Bernt
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by Matthias Bernt
Galaxy Development
Unable to install tools from toolshed/mercurial issue in release_18.05 instance by Peter Briggs
2
by Peter Briggs
Galaxy Development
MySQL errors and warnings with a fresh install of Galaxy 18-05 by FredBGA
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by FredBGA
Galaxy Development
instance management inspiration by Matthias Bernt
3
by Björn Grüning-3
Galaxy Development
pbs/torque jobs by Briand, Sheldon (NRC...
10
by Marius van den Beek
Galaxy Development
Conflicting conda dependencies for Galaxy tool by Peter Briggs
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by Peter Briggs
Galaxy Development
python: error while loading shared libraries by Floreline TOUCHARD
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by Floreline TOUCHARD
Galaxy Development
job deletion by Matthias Bernt
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by Matthias Bernt
Galaxy Development
galaxy upgrade 18.05 problem by Matthias Bernt
1
by Martin Čech
Galaxy Development
Permanently deleting users from a Galaxy instance by Peter Briggs
2
by Peter Briggs
Galaxy Development
problem with Visualization 'Scatterplot' in 18.05 by Hans-Rudolf Hotz
4
by Hans-Rudolf Hotz
Galaxy Development
Uploads via Nginx proxy fail after upgrade to current release by Hans-Georg Sommer
2
by Ignacio EGUINOA
Galaxy Development
Job Script Integrity by John Letaw
1
by John Chilton-4
Galaxy Development
tabular data display by Matthias Bernt
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by Matthias Bernt
Galaxy Development
argparse -> tool xml advice by Matthias Bernt
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by Matthias Bernt
Galaxy Development
Conda problem by David Lee
3
by Peter Cock
Galaxy Development
[galaxy-announce] The Galaxy release 18.05 is out by Martin Čech
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by Martin Čech
Galaxy Announcements
Workflow renaming problem for tool with multiple outputs (Galaxy version 17.09) by Previti
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by Previti
Galaxy Development
Purging "Monitor installing repositories" by Previti
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by Previti
Galaxy Development
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