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Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9447)
Replies Last Post Views Sub Forum
bwa_mem and "-t" option by David Kovalic-3
0
by David Kovalic-3
Galaxy Development
Shiny in Galaxy by Mohamed Kassam
2
by Yvan Le Bras-2
Galaxy Development
Uncaught Error When Installing Tools From Toolshed by Van Der Pol William
0
by Van Der Pol William
Galaxy Development
protein ligand docking by Matthias Bernt
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by Matthias Bernt
Galaxy Development
python subprocess OSError when running bwa-mem by Georgios Nikolis
3
by Hans-Rudolf Hotz
Galaxy Development
Decrease Galaxy polling of slurm? by pdblood
2
by pdblood
Galaxy Development
vcftools - errors running vcf-merge by Poole, Richard
0
by Poole, Richard
Galaxy Development
cluster access by Matthias Bernt
4
by Matthias Bernt
Galaxy Development
OpenBabel Requirements by Matthias Bernt
6
by Matthias Bernt
Galaxy Development
Which ID ('id', 'workflow_id', and 'dataset_id') should be used? by Aarthi Mohan
2
by Aarthi Mohan
Galaxy Development
Problem with dataset not being cleaned. by C. Ch.
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by C. Ch.
Galaxy Development
Project Publication Reference Tracking Tool -- are you interested in? by Krzysztof Kutt
2
by Dave Clements-3
Galaxy Development
location of history id by Aarthi Mohan-2
1
by John Chilton-4
Galaxy Development
Galaxy Start Up Error - Double Requirements, Tempita by Yip, Miu ki
1
by John Chilton-4
Galaxy Development
Pulsar - running as real DRMAA user problems by Poole, Richard
6
by Poole, Richard
Galaxy Development
Fwd: Galaxy Error while Using PBS by Jennifer Hillman-Jac...
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by Jennifer Hillman-Jac...
Galaxy Development
Unable to run workflow from command-line by Aarthi Mohan
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by Aarthi Mohan
Galaxy Development
python environment on SGE cluster nodes by David Simpson
3
by David Simpson
Galaxy Development
creating roles through the API by Lemley, Rob
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by Lemley, Rob
Galaxy Development
strange submit script by Nikolaos Tur
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by Nikolaos Tur
Galaxy Development
unable to install tools by Briand, Sheldon (NRC...
3
by Briand, Sheldon (NRC...
Galaxy Development
[galaxy-announce] May 2017 Galaxy News: GCC2017 deadlines, sponsors & BoFs; new papers, openings, tutorials... by Dave Clements-3
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by Dave Clements-3
Galaxy Announcements
keeping the original file name from the FTP pop-up by vazovn
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by vazovn
Galaxy Development
Singularity Container forks ? by Nikos Nikoloutsakos
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by Nikos Nikoloutsakos
Galaxy Development
uWSGI dataset request error by Dawes, Gwen
0
by Dawes, Gwen
Galaxy Development
Combine different resolvers for one tool by Ignacio EGUINOA
0
by Ignacio EGUINOA
Galaxy Development
Running jobs as real user and extra_file_path by Louise-Amélie Schmit...
3
by Peter Cock
Galaxy Development
Environmental Variable in <version_command> by D K
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by D K
Galaxy Development
Additional Information about users in the API by Milen Kouylekov
4
by Martin Čech
Galaxy Development
Galaxy User IDs and Group IDs by Lemley, Rob
1
by Martin Čech
Galaxy Development
conda path problem by Matthias Bernt
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by Matthias Bernt
Galaxy Development
conda installation fails by Matthias Bernt
3
by Matthias Bernt
Galaxy Development
[galaxy-announce] GCC2107 Oral presentation abstract deadline extended to 29 April by Dave Clements-3
0
by Dave Clements-3
Galaxy Announcements
atlas version 3.10.2 installation error by Matthias Bernt
8
by Peter Cock
Galaxy Development
Testing updated NCBI BLAST+ wrappers for version 2.5.0 by Peter Cock
1
by Peter Cock
Galaxy Development
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