Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9820)
Replies Last Post Views Sub Forum
asking about allignment figure by Chandra Trihadi
1
by Jen Hillman-Jackson
Galaxy Users
Adding job by Filip Balejko
0
by Filip Balejko
Galaxy Development
Enabling User Pages by Jesse Erdmann
6
by Jesse Erdmann
Galaxy Development
Indexing Rat genome - Baylor 3.4/rn4 query by Clokie, Samuel (NIH/...
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by Clokie, Samuel (NIH/...
Galaxy Users
SNP effect prediction by Pablo Cingolani
2
by Pablo Cingolani
Galaxy Development
Data Library Uploading Issue by Juan Carlos Perin
1
by Assaf Gordon-2
Galaxy Development
Re: [galaxy-user] Data Libraries Problems by Greg Von Kuster
2
by Assaf Gordon-2
Galaxy Development
Re: [galaxy-bugs] asking for the third times by Yohanna Gita Chandra
0
by Yohanna Gita Chandra
Galaxy Users
handling multiple output files on galaxy. by Vipin TS
0
by Vipin TS
Galaxy Development
Recently used tools options by Assaf Gordon-2
1
by Jeremy Goecks
Galaxy Development
Data Libraries Problems by Juan Carlos Perin
1
by Greg Von Kuster
Galaxy Users
New Galaxy Community tool sharing site now available by Greg Von Kuster
1
by Davide Cittaro
Galaxy Development
New Galaxy Community tool sharing site now available by Greg Von Kuster
0
by Greg Von Kuster
Galaxy Users
sge & pbs job dependency by Andrey Tovchigrechko
1
by James Taylor
Galaxy Development
TopHat with FASTA and Illumina FASTQ by Assaf Gordon-2
0
by Assaf Gordon-2
Galaxy Development
Problem with history association after upgrade to 4cdf4cca0f31 by Dennis Gascoigne-2
1
by Nate Coraor (nate@bx...
Galaxy Development
Issue with manage_db.py by Dennis Gascoigne-2
1
by Nate Coraor (nate@bx...
Galaxy Development
User file access without uploading? by Michael Siebauer
9
by Michael Siebauer
Galaxy Development
Samtools and BAM by Davide Cittaro
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by Davide Cittaro
Galaxy Development
Workflow post-actions by Assaf Gordon-2
3
by Dennis Gascoigne-2
Galaxy Development
optional=true for param type=float by Michael Pheasant
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by Michael Pheasant
Galaxy Development
History Import/Export by Assaf Gordon-2
5
by Dennis Gascoigne-2
Galaxy Development
minor error while upgrading database to version 50 by Assaf Gordon-2
3
by Enis Afgan-2
Galaxy Development
Bowtie with FASTA and Illumina FASTQ by Assaf Gordon-2
0
by Assaf Gordon-2
Galaxy Development
N-way splitter (poor man's parallelization) by Assaf Gordon-2
0
by Assaf Gordon-2
Galaxy Development
broken links in workflow by Michael Wilson-4
1
by Jeremy Goecks
Galaxy Development
Illumina srf format... by Davide Cittaro
0
by Davide Cittaro
Galaxy Development
Command tag in Galaxy by Sumedha Ganjoo
1
by Jesse Erdmann
Galaxy Development
New 5' start site, 3' end site and long internal coding exons by Yanwei Tan
3
by Jen Hillman-Jackson
Galaxy Users
Adding users under external authentication by Davide Cittaro
4
by Davide Cittaro
Galaxy Development
hesus RheMac2 genome by Lakshmanan Iyer
0
by Lakshmanan Iyer
Galaxy Users
Running workflows from the command line by Erick Antezana-2
1
by Nate Coraor (nate@bx...
Galaxy Users
error message printed unescaped into html stream - cant figure out what the error message is by Michael Pheasant
1
by Nate Coraor (nate@bx...
Galaxy Development
Admin/developer toolbar to speed up tool development. by Renaud Gaujoux
0
by Renaud Gaujoux
Galaxy Development
Galaxy on the cloud requests by Martin Paradesi
5
by Brad Chapman
Galaxy Development
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