Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9803)
Replies Last Post Views Sub Forum
Running Galaxy behind Apache Proxy by Michael Siebauer
1
by Nate Coraor (nate@bx...
Galaxy Development
Some eggs are out of date (not really) by Pieter Neerincx-3
1
by Nate Coraor (nate@bx...
Galaxy Users
MySQL by SHAUN WEBB
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by Nate Coraor (nate@bx...
Galaxy Development
Tarballs download links dead @ galaxy-central by Pieter Neerincx-3
1
by Nate Coraor (nate@bx...
Galaxy Development
Compressed File Storage by Dennis Gascoigne-2
1
by Nate Coraor (nate@bx...
Galaxy Development
import error: no file bz2 by wenqing zhang
1
by Nate Coraor (nate@bx...
Galaxy Development
Re: Installing galaxy with sge by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
Galaxy Development
June 21, 2010 Galaxy Development News Brief by Greg Von Kuster
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by Greg Von Kuster
Galaxy Users
Deconvoluting NGS samples with multiple barcodes by Pip Griffin
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by Pip Griffin
Galaxy Users
Allow zip file upload by Pablo Cingolani
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by Pablo Cingolani
Galaxy Development
Slow FASTQ-Groomer / Illumina input for tools by Assaf Gordon-2
1
by Jeremy Goecks
Galaxy Development
Composite Datatypes by Filip Balejko
1
by Filip Balejko
Galaxy Development
Workflow - Conditional change in output not recognized by Dennis Gascoigne-2
1
by Daniel Blankenberg
Galaxy Development
the display of bam files from galaxy behind apache is not working by TRBarrette
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by TRBarrette
Galaxy Development
Workflow improvement suggestion by Dennis Gascoigne-2
3
by Dannon Baker
Galaxy Development
Viewport generation error by SHAUN WEBB
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by SHAUN WEBB
Galaxy Development
Server Error by Rathi Thiagarajan
1
by Nate Coraor (nate@bx...
Galaxy Users
Galaxy cloud problem by Martin Paradesi
2
by Enis Afgan-2
Galaxy Development
add eggs by Karl Nordström
1
by Enis Afgan-3
Galaxy Development
Help: History panel of Galaxy interface shows traceback operational error by wenqing zhang-2
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by wenqing zhang-2
Galaxy Development
News briefs for Galaxy distribution updates by Greg Von Kuster
2
by Greg Von Kuster
Galaxy Development
Re: [galaxy-bugs] How to make a data library in a local galaxy instance? by Greg Von Kuster
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by Greg Von Kuster
Galaxy Development
Again on display on external UCSC by Davide Cittaro
2
by Davide Cittaro
Galaxy Development
help: can't connect to external mysql atabase by wenqing zhang-2
3
by Greg Von Kuster
Galaxy Development
News briefs for Galaxy distribution updates by Greg Von Kuster
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by Greg Von Kuster
Galaxy Users
Upload genome index to Galaxy for Bowtie alignment? by jjw14
4
by Kelly Vincent-2
Galaxy Users
FASTQ to FASTA tool by Omri Finkel
6
by Daniel Blankenberg
Galaxy Users
Setting Output Type with different input types by Dennis Gascoigne-2
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by Dennis Gascoigne-2
Galaxy Development
Clean up datsets script by SHAUN WEBB
3
by Greg Von Kuster
Galaxy Development
tophat and cufflinks by Nguyen, Doan
1
by Jeremy Goecks
Galaxy Users
Fwd: Histogram Data by Assaf Gordon-2
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by Assaf Gordon-2
Galaxy Development
Job output not returned from cluster by Erick Antezana-2
1
by Erick Antezana-2
Galaxy Users
Naming workflow steps for use in history by Dennis Gascoigne-2
0
by Dennis Gascoigne-2
Galaxy Development
Re: [galaxy-bugs] Help with mRNA sequences by Anton Nekrutenko
0
by Anton Nekrutenko
Galaxy Users
[galaxy-dev] Incorporating Velvet and Interproscan into Galaxy by Paszkiewicz, Konrad
5
by Jim Johnson
Galaxy Development
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