Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9820)
Replies Last Post Views Sub Forum
get job update_time & update_time-create_time as label in history by Michael Pheasant
0
by Michael Pheasant
Galaxy Development
Developing Tools With Java by Elie Freilich
1
by Jesse Erdmann
Galaxy Development
Workflow Post Job Actions and Cleanup scripts by Dennis Gascoigne-2
1
by Dannon Baker
Galaxy Development
Error when dowloading large compressed data library by padioleau
2
by Nate Coraor (nate@bx...
Galaxy Development
is it possible to upload files to different local directories based on the galaxy upload.py script? by amenda lee
1
by Nate Coraor (nate@bx...
Galaxy Development
Cleaning Data Sets by Chris Zaleski
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by Chris Zaleski
Galaxy Development
the display of bam files from galaxy behind apache is not working by Terrence Barrette
17
by Brad Chapman
Galaxy Development
Is it possible to upload different files to different directories by Galaxy upload.py script? by amenda lee
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by amenda lee
Galaxy Users
June 21, 2010 Galaxy Development News Brief by Greg Von Kuster
4
by Kanwei Li
Galaxy Development
How do I contribute a bug-fix? by Pablo Cingolani
2
by Nate Coraor (nate@bx...
Galaxy Development
More flexible use of Sun Grid Engine by Galaxy by Peter van Heusden
2
by Nate Coraor (nate@bx...
Galaxy Development
query on upload files from file system path by Vipin TS
1
by Brad Chapman
Galaxy Development
problems with Explorer(6) on WinXP when looking at "Saved Histories" by Hans-Rudolf Hotz
1
by Kanwei Li
Galaxy Development
parallelizing an NGS mapping workflow by Chris Berthiaume
1
by Nate Coraor (nate@bx...
Galaxy Users
problems with install on OSX 10.5, Python 2.5.1 by Arlin Stoltzfus
1
by Nate Coraor (nate@bx...
Galaxy Development
NGS data library construction by Terrence Barrette
1
by Nate Coraor (nate@bx...
Galaxy Development
Lunch job as connected user by Mariette
1
by Nate Coraor (nate@bx...
Galaxy Development
Running Galaxy behind Apache Proxy by Michael Siebauer
1
by Nate Coraor (nate@bx...
Galaxy Development
Some eggs are out of date (not really) by Pieter Neerincx-3
1
by Nate Coraor (nate@bx...
Galaxy Users
MySQL by SHAUN WEBB
1
by Nate Coraor (nate@bx...
Galaxy Development
Tarballs download links dead @ galaxy-central by Pieter Neerincx-3
1
by Nate Coraor (nate@bx...
Galaxy Development
Compressed File Storage by Dennis Gascoigne-2
1
by Nate Coraor (nate@bx...
Galaxy Development
import error: no file bz2 by wenqing zhang
1
by Nate Coraor (nate@bx...
Galaxy Development
Re: Installing galaxy with sge by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
Galaxy Development
June 21, 2010 Galaxy Development News Brief by Greg Von Kuster
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by Greg Von Kuster
Galaxy Users
Deconvoluting NGS samples with multiple barcodes by Pip Griffin
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by Pip Griffin
Galaxy Users
Allow zip file upload by Pablo Cingolani
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by Pablo Cingolani
Galaxy Development
Slow FASTQ-Groomer / Illumina input for tools by Assaf Gordon-2
1
by Jeremy Goecks
Galaxy Development
Composite Datatypes by Filip Balejko
1
by Filip Balejko
Galaxy Development
Workflow - Conditional change in output not recognized by Dennis Gascoigne-2
1
by Daniel Blankenberg
Galaxy Development
the display of bam files from galaxy behind apache is not working by TRBarrette
0
by TRBarrette
Galaxy Development
Workflow improvement suggestion by Dennis Gascoigne-2
3
by Dannon Baker
Galaxy Development
Viewport generation error by SHAUN WEBB
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by SHAUN WEBB
Galaxy Development
Server Error by Rathi Thiagarajan
1
by Nate Coraor (nate@bx...
Galaxy Users
Galaxy cloud problem by Martin Paradesi
2
by Enis Afgan-2
Galaxy Development
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