Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9806)
Replies Last Post Views Sub Forum
Naming workflow steps for use in history by Dennis Gascoigne-2
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by Dennis Gascoigne-2
Galaxy Development
Re: [galaxy-bugs] Help with mRNA sequences by Anton Nekrutenko
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by Anton Nekrutenko
Galaxy Users
[galaxy-dev] Incorporating Velvet and Interproscan into Galaxy by Paszkiewicz, Konrad
5
by Jim Johnson
Galaxy Development
Re: Welcome to the "galaxy-user" mailing list by Ana Sevilla
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by Ana Sevilla
Galaxy Users
Fwd: [galaxy-bugs] Help with mRNA sequences by Anton Nekrutenko
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by Anton Nekrutenko
Galaxy Users
Make Galaxy use multiple processors by Dennis Gascoigne-2
9
by Nate Coraor (nate@bx...
Galaxy Development
Problems saving workflow that includes 'manipulate fastq' by Pip Griffin
8
by Pip Griffin
Galaxy Users
minor problems with the new custom dropdown-listbox control by Assaf Gordon-2
5
by Assaf Gordon-2
Galaxy Development
Lunch job as connected user by Mariette
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by Mariette
Galaxy Users
Reorganizing tool menu by Bossers, Alex
1
by Dennis Gascoigne-2
Galaxy Development
Galaxy developer conference material? by Erick Antezana-2
4
by Mitsuteru Nakao
Galaxy Users
Limiting user access by Stewart Stevens
1
by Greg Von Kuster
Galaxy Users
Deleting accounts by Pieter Neerincx-3
3
by Greg Von Kuster
Galaxy Users
file formats in workflows by Paul Webster
2
by Paul Webster
Galaxy Users
links missing on history items sometimes by Michael Pheasant
3
by Kanwei Li
Galaxy Development
Re: Question on Illumina read data upload to Galaxy by Anton Nekrutenko
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by Anton Nekrutenko
Galaxy Users
[galaxy-dev] display_application by Davide Cittaro
9
by Modi, Amit
Galaxy Development
Installing galaxy with sge by Mariette
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by Mariette
Galaxy Users
[galaxy-user] Intersect BED data by Stephen Taylor
4
by Stephen Taylor
Galaxy Users
[galaxy-user] SNPs and conservation by Paul Webster
2
by Paul Webster
Galaxy Users
[galaxy-dev] job recovery Q by Michael Pheasant
1
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Galaxy with non-SGE/non-Torque distributed jobs by Andrey Tovchigrechko
3
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Sourcing Files from Datasets by Dennis Gascoigne-2
1
by Jeremy Goecks
Galaxy Development
[galaxy-dev] how to activate account to allow remote access? by Edward Kirton
1
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Integrating Galaxy into our Kerberos auth by Peter van Heusden
1
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Running multiple files automatically within workflows by Juan Carlos Perin
1
by Jeremy Goecks
Galaxy Development
[galaxy-dev] Input type 'data' sorting - sometimes text, sometimes numeric by Dennis Gascoigne-2
4
by Jeremy Goecks
Galaxy Development
[galaxy-user] downloading huge data sets from history using wget by pis
3
by Florent Angly
Galaxy Users
[galaxy-dev] FW: make cgi - Error from CVS download by McCully, Dwayne (NIH...
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by McCully, Dwayne (NIH...
Galaxy Development
[galaxy-dev] error when try to add datafiles by Edward Kirton-2
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by Edward Kirton-2
Galaxy Development
Re: [galaxy-dev] [Genome-mirror] Enabling bigWig for galaxy by Angie Hinrichs
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by Angie Hinrichs
Galaxy Development
[galaxy-user] nmslss Lee Sze Sing is out of the office. by Lee.Sze.Sing
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by Lee.Sze.Sing
Galaxy Users
[galaxy-dev] external ucsc link not working for BAM by Davide Cittaro
6
by Davide Cittaro
Galaxy Development
[galaxy-user] Problems with Galaxy kindly reply urgently by pande
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by pande
Galaxy Users
[galaxy-user] Problems with Galaxy kindly reply urgently by pande
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by pande
Galaxy Users
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