Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9820)
Replies Last Post Views Sub Forum
add eggs by Karl Nordström
1
by Enis Afgan-3
Galaxy Development
Help: History panel of Galaxy interface shows traceback operational error by wenqing zhang-2
2
by wenqing zhang-2
Galaxy Development
News briefs for Galaxy distribution updates by Greg Von Kuster
2
by Greg Von Kuster
Galaxy Development
Re: [galaxy-bugs] How to make a data library in a local galaxy instance? by Greg Von Kuster
0
by Greg Von Kuster
Galaxy Development
Again on display on external UCSC by Davide Cittaro
2
by Davide Cittaro
Galaxy Development
help: can't connect to external mysql atabase by wenqing zhang-2
3
by Greg Von Kuster
Galaxy Development
News briefs for Galaxy distribution updates by Greg Von Kuster
0
by Greg Von Kuster
Galaxy Users
Upload genome index to Galaxy for Bowtie alignment? by jjw14
4
by Kelly Vincent-2
Galaxy Users
FASTQ to FASTA tool by Omri Finkel
6
by Daniel Blankenberg
Galaxy Users
Setting Output Type with different input types by Dennis Gascoigne-2
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by Dennis Gascoigne-2
Galaxy Development
Clean up datsets script by SHAUN WEBB
3
by Greg Von Kuster
Galaxy Development
tophat and cufflinks by Nguyen, Doan
1
by Jeremy Goecks
Galaxy Users
Fwd: Histogram Data by Assaf Gordon-2
0
by Assaf Gordon-2
Galaxy Development
Job output not returned from cluster by Erick Antezana-2
1
by Erick Antezana-2
Galaxy Users
Naming workflow steps for use in history by Dennis Gascoigne-2
0
by Dennis Gascoigne-2
Galaxy Development
Re: [galaxy-bugs] Help with mRNA sequences by Anton Nekrutenko
0
by Anton Nekrutenko
Galaxy Users
[galaxy-dev] Incorporating Velvet and Interproscan into Galaxy by Paszkiewicz, Konrad
5
by Jim Johnson
Galaxy Development
Re: Welcome to the "galaxy-user" mailing list by Ana Sevilla
0
by Ana Sevilla
Galaxy Users
Fwd: [galaxy-bugs] Help with mRNA sequences by Anton Nekrutenko
0
by Anton Nekrutenko
Galaxy Users
Make Galaxy use multiple processors by Dennis Gascoigne-2
9
by Nate Coraor (nate@bx...
Galaxy Development
Problems saving workflow that includes 'manipulate fastq' by Pip Griffin
8
by Pip Griffin
Galaxy Users
minor problems with the new custom dropdown-listbox control by Assaf Gordon-2
5
by Assaf Gordon-2
Galaxy Development
Lunch job as connected user by Mariette
0
by Mariette
Galaxy Users
Reorganizing tool menu by Bossers, Alex
1
by Dennis Gascoigne-2
Galaxy Development
Galaxy developer conference material? by Erick Antezana-2
4
by Mitsuteru Nakao
Galaxy Users
Limiting user access by Stewart Stevens
1
by Greg Von Kuster
Galaxy Users
Deleting accounts by Pieter Neerincx-3
3
by Greg Von Kuster
Galaxy Users
file formats in workflows by Paul Webster
2
by Paul Webster
Galaxy Users
links missing on history items sometimes by Michael Pheasant
3
by Kanwei Li
Galaxy Development
Re: Question on Illumina read data upload to Galaxy by Anton Nekrutenko
0
by Anton Nekrutenko
Galaxy Users
[galaxy-dev] display_application by Davide Cittaro
9
by Modi, Amit
Galaxy Development
Installing galaxy with sge by Mariette
0
by Mariette
Galaxy Users
[galaxy-user] Intersect BED data by Stephen Taylor
4
by Stephen Taylor
Galaxy Users
[galaxy-user] SNPs and conservation by Paul Webster
2
by Paul Webster
Galaxy Users
[galaxy-dev] job recovery Q by Michael Pheasant
1
by Nate Coraor (nate@bx...
Galaxy Development
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