Galaxy

Galaxy Project

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.

Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

Note that the Galaxy-Users list is no longer active. It has been replaced by the Galaxy Biostar online forum.

Galaxy is a part of the Generic Model Organism Database (GMOD) project.



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Topics (9815)
Replies Last Post Views Sub Forum
[galaxy-dev] Input type 'data' sorting - sometimes text, sometimes numeric by Dennis Gascoigne-2
4
by Jeremy Goecks
Galaxy Development
[galaxy-user] downloading huge data sets from history using wget by pis
3
by Florent Angly
Galaxy Users
[galaxy-dev] FW: make cgi - Error from CVS download by McCully, Dwayne (NIH...
0
by McCully, Dwayne (NIH...
Galaxy Development
[galaxy-dev] error when try to add datafiles by Edward Kirton-2
0
by Edward Kirton-2
Galaxy Development
Re: [galaxy-dev] [Genome-mirror] Enabling bigWig for galaxy by Angie Hinrichs
0
by Angie Hinrichs
Galaxy Development
[galaxy-user] nmslss Lee Sze Sing is out of the office. by Lee.Sze.Sing
0
by Lee.Sze.Sing
Galaxy Users
[galaxy-dev] external ucsc link not working for BAM by Davide Cittaro
6
by Davide Cittaro
Galaxy Development
[galaxy-user] Problems with Galaxy kindly reply urgently by pande
0
by pande
Galaxy Users
[galaxy-user] Problems with Galaxy kindly reply urgently by pande
0
by pande
Galaxy Users
[galaxy-dev] Enabling bigWig for galaxy by Davide Cittaro
0
by Davide Cittaro
Galaxy Development
Re: [galaxy-dev] [galaxy-user] Custom java tool by Daniel Blankenberg
1
by Nils Homer
Galaxy Development
[galaxy-dev] question about bam and bai by Davide Cittaro
3
by Greg Von Kuster
Galaxy Development
[galaxy-dev] Complex (relatively) tool config - accessing metadata and columns in select by Dennis Gascoigne-2
1
by Dennis Gascoigne-2
Galaxy Development
[galaxy-dev] user registration bug by Assaf Gordon-2
3
by Assaf Gordon-2
Galaxy Development
[galaxy-dev] Lightning Talk Slides by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Relaoding tools and tool menu in multiprocess setup by Dennis Gascoigne-2
2
by Assaf Gordon-2
Galaxy Development
[galaxy-dev] ldap integration by Davide Cittaro
15
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Select from Database as tool option by Dennis Gascoigne-2
0
by Dennis Gascoigne-2
Galaxy Development
[galaxy-dev] need help on extra servers by Davide Cittaro
6
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Error on save large file - out of memory by Dennis Gascoigne-2
1
by Nate Coraor (nate@bx...
Galaxy Development
[galaxy-dev] Amazon EC2 install dataset Upload problems by Dennis Gascoigne-2
2
by Enis Afgan-2
Galaxy Development
[galaxy-user] installing galaxy by pande
0
by pande
Galaxy Users
[galaxy-dev] Problem with import to data library from history by Dennis Gascoigne-2
1
by Dennis Gascoigne-2
Galaxy Development
[galaxy-user] Issue with saving 'manipulate fastq' in workflow; and request for advice dealing with barcoded 454 data by Pip Griffin
0
by Pip Griffin
Galaxy Users
[galaxy-dev] Extract Workflow Error by Dennis Gascoigne-2
2
by James Taylor
Galaxy Development
[galaxy-user] Fwd: To get the gene name from BED file by Anton Nekrutenko
3
by Andre Pitaluga
Galaxy Users
[galaxy-dev] about sequencing requests by Davide Cittaro
5
by Ramkrishna Chakrabar...
Galaxy Development
[galaxy-user] To get the gene name from BED file by Shibu John
0
by Shibu John
Galaxy Users
[galaxy-dev] doesn't authenticate anymore by Davide Cittaro
1
by Davide Cittaro
Galaxy Development
[galaxy-dev] Tool config Cheetah errors by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
Galaxy Development
Re: [galaxy-dev] [galaxy-user] Problems installing Galaxy by Nate Coraor (nate@bx...
1
by Modi, Amit
Galaxy Development
[galaxy-dev] again on multiple server instances by Davide Cittaro
6
by Jesse Erdmann
Galaxy Development
[galaxy-dev] Enabling Pages by Juan Carlos Perin
1
by Jeremy Goecks
Galaxy Development
[galaxy-dev] Galaxy Sample Tracking System by David Sidote
3
by Brad Chapman
Galaxy Development
[galaxy-dev] Next gen sample submission patch by Brad Chapman
0
by Brad Chapman
Galaxy Development
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