Is there a guide that describes how to manually complete the steps that are done by the setup.sh script? We are trying to setup jbrowse in a hosted environment where we do not have access to the server only our site. Thank you, Aaron Spies Database Administrator Lead UCF College of Medicine Office: (407) 266-1239 ------------------------------------------------------------------------------ Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot _______________________________________________ Gmod-ajax mailing list [hidden email] https://lists.sourceforge.net/lists/listinfo/gmod-ajax |
Hi Aaron, I don't know of such a guide, but here's what I'd suggest: set up JBrowse on a server where you do have control. Use that as a staging server, where you process the data and get it looking the way you want it to look. When you're happy with it, transfer the whole jbrowse directory to the hosted server, where it will "just work". When you have updates, do them on the staging server and then rsync to the hosted server (or whatever similar functionality the hosted server provides). Scott On Fri, Mar 31, 2017 at 7:59 AM, Aaron Spies <[hidden email]> wrote:
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Scott Cain, Ph. D. scott at scottcain dot net GMOD Coordinator (http://gmod.org/) 216-392-3087 Ontario Institute for Cancer Research ------------------------------------------------------------------------------ Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot _______________________________________________ Gmod-ajax mailing list [hidden email] https://lists.sourceforge.net/lists/listinfo/gmod-ajax |
Hi Scott,
Thank you for the information. We tried this but we are still seeing the welcome message stating that the baseurl has not been configured. I was not sure if the script hardcoded any directory paths or settings that were server specific.
Aaron Spies Sent via mobile device
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Aaron, Is there a reason you can’t follow the steps identified in the setup.sh script? Are you getting any errors in the javascript console? Also, is there a way we could find the configuration file or corresponding directory layout? Nathan
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