[Gmod-ajax] ProportionalMultiBw - plugin released

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[Gmod-ajax] ProportionalMultiBw - plugin released

Keiran Raine
Hi,

I've recently finished a first version of the above plugin.  Please see the github repository for full details.


Originally devised for use with targeted sequencing but we've found it works reasonably well for WXS too.


There are still a few improvements I'd like to make for performance reasons though.

Regards,

Keiran Raine
Principal Bioinformatician
Cancer Genome Project
Wellcome Trust Sanger Institute

Tel:+44 (0)1223 834244 Ext: 7703
Office: H104


-- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.

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Re: ProportionalMultiBw - plugin released

Eric Yao
Nice job, Keiran.
It looks great!
Please consider adding your plugin to the jbrowse registry:
It's not fully up yet, but soon will be.

On Thu, Sep 15, 2016 at 5:06 AM, Keiran Raine <[hidden email]> wrote:
Hi,

I've recently finished a first version of the above plugin.  Please see the github repository for full details.


Originally devised for use with targeted sequencing but we've found it works reasonably well for WXS too.


There are still a few improvements I'd like to make for performance reasons though.

Regards,

Keiran Raine
Principal Bioinformatician
Cancer Genome Project
Wellcome Trust Sanger Institute

Tel:<a href="tel:%2B44%20%280%291223%20834244%20Ext%3A%207703" value="+441223834244" target="_blank">+44 (0)1223 834244 Ext: 7703
Office: H104


-- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.

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Re: ProportionalMultiBw - plugin released

Keiran Raine
Ah yes, I've added it to the unofficial one but will add it here.

I've made some huge performance improvements in the last couple of days and will be pushing the changes once I fix up some tests.

Regards,

Keiran Raine
Principal Bioinformatician
Cancer Genome Project
Wellcome Trust Sanger Institute

Tel:+44 (0)1223 834244 Ext: 7703
Office: H104

On 16 Sep 2016, at 07:42, Eric Yao <[hidden email]> wrote:

Nice job, Keiran.
It looks great!
Please consider adding your plugin to the jbrowse registry:
It's not fully up yet, but soon will be.

On Thu, Sep 15, 2016 at 5:06 AM, Keiran Raine <[hidden email]> wrote:
Hi,

I've recently finished a first version of the above plugin.  Please see the github repository for full details.


Originally devised for use with targeted sequencing but we've found it works reasonably well for WXS too.

<XY.png>

There are still a few improvements I'd like to make for performance reasons though.

Regards,

Keiran Raine
Principal Bioinformatician
Cancer Genome Project
Wellcome Trust Sanger Institute

Tel:<a href="tel:%2B44%20%280%291223%20834244%20Ext%3A%207703" value="+441223834244" target="_blank" class="">+44 (0)1223 834244 Ext: 7703
Office: H104


-- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.

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-- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.

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