For some genomes and their annotations, I could load GFF3 and display them properly, as well as run generate-names.pl without any errors. The generated name index also looked fine, but I was unable to see auto-completion in the search window. I double-checked the GFF3 files and indices, they both looked perfectly normal (see below). Would anyone suggest some possible causes? The only difference with these genomes is that they consist of over 10,000 contigs or scaffolds. Is this something related to the indexing problem?
Tracks: genes miRNAs Sampled input stats: avg record text bytes 16 name input records 12168 operation stream estimated count 954168 record stream estimated count 79514 total namerec bytes 194688 total input bytes 1272234 operations made 50000 namerecs buffered 12168 namerecs converted to operations 4003 Removing existing contents of target dir data/json/xxxx/names Hash store cache size: 2684 buckets Using 1 chars for sort log names (16 sort logs)