[Gmod-tripal-devel] Telling BLAST XML parser to use local database ids

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[Gmod-tripal-devel] Telling BLAST XML parser to use local database ids

Mara Kim-2

Is it possible to tell the Tripal BLAST XML parser to interpret the 'query-def' and 'hit-def' to be feature ids in the Chado schema?  Currently I see that it uses dbxrefs to resolve names, but for BLASTs done using the Chado instance as a backend, it would be nice to be able to have the XML parser be able to link results to the native feature ids.

Mara Kim

Ph.D. Candidate
Computational Biology
Vanderbilt University
Nashville, TN

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