ISGA 1.3.2 is now available for download at
https://sourceforge.net/projects/isga/With this release, we have moved our development and downloads to
SourceForge. For the time being, installation instructions will still be
hosted at the CGB and are available at:
https://wiki.cgb.indiana.edu/display/brp/isga-install-1.3To reiterate the changes in 1.3.2 compared to the previous version of ISGA
available for download -
New Prokaryotic Annotation Pipeline Release:
- All calls to wu-blast programs have been replaced with NCBI blast
- We have enabled the pathway image output for Asgard
- Reference databases have been updated
- Improved validation and auto-correction of Fasta input
- Streamline output-generation and include more information in summary
files
Other New Features:
- Pipelines are now modular and can be installed independently of the
ISGA installation process
- Workbench interface has been standardized to make adding new tools
easier
- Added PhyloEGGS tool for studying gene clusters across phylogenies
of prokaryotes.
- Added ability to "upload" files to ISGA by providing a URL
- Fixed several instances where large files were read in entirety into
memory
Cheers,
Chris Hemmerich
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