Indel analysis

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Indel analysis

Golbus, Jessica
Hi-

I am using Galaxy for Indel analysis.  Does the Indels from Sam analysis use Dindel to pull variation?

Thanks!


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Re: Indel analysis

Anton Nekrutenko
<base href="x-msg://68/">Jessica:

No, dindel is not yet a part of Penn State Galaxy Instance.

anton


Anton Nekrutenko




On Sep 28, 2011, at 12:21 PM, Golbus, Jessica wrote:

Hi-

I am using Galaxy for Indel analysis.  Does the Indels from Sam analysis use Dindel to pull variation?

Thanks!


**********************************************************
Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues 
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

 http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

 http://lists.bx.psu.edu/


___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

  http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

  http://lists.bx.psu.edu/