Issues with Maker - RepBase

classic Classic list List threaded Threaded
2 messages Options
Reply | Threaded
Open this post in threaded view
|

Issues with Maker - RepBase

nathan.ricks

Hi,

I’ve been having some issues getting Maker to run correctly. I don’t have a huge amount of Linux background, so perhaps that is why.

When I run it, it says

WARNING: RepBase is not installed for RepeatMasker.

So I’ve tried getting RepBase installed, and I’m not sure what to do.

I downloaded the RepbaseRepeaMaskerEdition-20170127.tar.gz and I’ve tried unpacking , but it doesn’t give me a file I can work with, all it gives me is a folder named Library with very little in it. I’m assuming that I need to take that folder and put it somewhere in the RepeatMasker folder, but I’m not exactly sure what to do.

Thank you for your time

Nathan Ricks

 

 


_______________________________________________
maker-devel mailing list
[hidden email]
http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org
Reply | Threaded
Open this post in threaded view
|

Re: Issues with Maker - RepBase

Carson Holt-2
You must unpack it inside the RepeatMasker distribution per the setup instructions —> http://www.repeatmasker.org/RMDownload.html

It replaces files in the …/RepeatMasker/Library folder when unpacked.

After unpacking RepBase, you must follow the configuration instructions (same link above). Make sure to configure RepeatMasker only after unpacking RepBase.

—Carson



On Apr 28, 2017, at 9:47 AM, <[hidden email]> <[hidden email]> wrote:

Hi,
I’ve been having some issues getting Maker to run correctly. I don’t have a huge amount of Linux background, so perhaps that is why.
When I run it, it says
WARNING: RepBase is not installed for RepeatMasker.
So I’ve tried getting RepBase installed, and I’m not sure what to do.
I downloaded the RepbaseRepeaMaskerEdition-20170127.tar.gz and I’ve tried unpacking , but it doesn’t give me a file I can work with, all it gives me is a folder named Library with very little in it. I’m assuming that I need to take that folder and put it somewhere in the RepeatMasker folder, but I’m not exactly sure what to do.
Thank you for your time
Nathan Ricks
 
 
_______________________________________________
maker-devel mailing list
[hidden email]
http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org


_______________________________________________
maker-devel mailing list
[hidden email]
http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org