MAKER changelog?

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MAKER changelog?

Tim Fallon
Hi there,

I recently noticed the MAKER 3.0 beta version incremented from 3.0.0., to 3.01.1.  Is there a changelog which describes the updates between the two releases?

All the best,
-Tim

Timothy R. Fallon
PhD candidate
Laboratory of Jing-Ke Weng
Department of Biology
MIT



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Re: MAKER changelog?

Carson Holt-2
Here you go.

*updated the locations for repbase and augustus
*make library install more portable for newer perl versions
*fix for cdna2genome single exon strand
*updates for beter hints in augustus (exact rather than partial intron match)
*added allow_overlap for UTR in fungi and prokaryotes
*uri escape snap name in zff conversion
*fix for BioPerl-live related error (also submitted fix to BioPerl)
*jaccard cluster and bug fixes for cigar string
*Added zff2genebank script for training augustus (adapted from Jason Stajich's zff2augustus_gbk.pl)

—Carson


On Sep 26, 2017, at 11:40 AM, Tim Fallon <[hidden email]> wrote:

Hi there,

I recently noticed the MAKER 3.0 beta version incremented from 3.0.0., to 3.01.1.  Is there a changelog which describes the updates between the two releases?

All the best,
-Tim

Timothy R. Fallon
PhD candidate
Laboratory of Jing-Ke Weng
Department of Biology
MIT


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maker-devel mailing list
[hidden email]
http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org


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