MAKER

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User support and development list for the MAKER genome annotation pipeline. MAKER is a part of the Generic Model Organism Database (GMOD) project.

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Topics (1037)
Replies Last Post Views
fix nucleotides option on MWAS by Humann, Jodi Lynn
3
by Carson Holt-2
Fewer gene models output with a superset of EST evidence by Bob Zimmermann
2
by Carson Holt-2
Backlash running through my sequence by Emmanuel Nnadi
4
by Carson Holt-2
Re: maker-devel Digest, Vol 113, Issue 13 by Jia-Xing Yue-2
1
by Carson Holt-2
Advanced repeat library construction - CRL step 4 assistance by ZACHARY STEWART
1
by Xabier Vázquez Campo...
choosing the right gene model by Xabier Vázquez Campo...
2
by Xabier Vázquez Campo...
jbrowse not working by Emmanuel Nnadi
3
by Carson Holt-2
Maker problem by Jan FABI
1
by Carson Holt-2
custom "ab initio" predictions with automatic hint-based predictions by Bob Zimmermann
1
by Carson Holt-2
MAKER RepeatRunner error on long scaffolds only by Daren C. Card
5
by Carson Holt-2
Call for presentations at GMOD workshop at PAG by Scott Cain
0
by Scott Cain
QI codes insufficient - how to get frac exons with EST only? by Matt Simenc
3
by Matt Simenc
MAKER annotation submission (EMBLmyGFF3) by Jacques Dainat-4
0
by Jacques Dainat-4
Error with Maker_functional_gff by Emmanuel Nnadi
1
by Daniel Ence-2
About eAED by Quanwei Zhang
7
by Quanwei Zhang
question on gene numbers with quality_filter.pl by Willett, Christopher...
3
by Willett, Christopher...
gene annotation for a better genome by Quanwei Zhang
1
by Carson Holt-2
Suggestions if too many predicted genes by Quanwei Zhang
4
by Quanwei Zhang
MAKER changelog? by Tim Fallon
1
by Carson Holt-2
question about Maker-MPI by Xabier Vázquez Campo...
1
by Carson Holt-2
Maker not installing by Emmanuel Nnadi
13
by Carson Holt-2
integrate gmap into Maker by Wen Yao
1
by Daniel Ence-2
Re: MAKER by Carson Holt
2
by Carson Holt
Advice on my pipeline by Patrick Tran Van-2
7
by Carson Holt-2
Maker MPI across nodes by James Cross (ITCS - ...
1
by Carson Holt-2
Fwd: maker error by himani malhotra
2
by Carson Holt-2
augustus underpredicting by Xabier Vázquez Campo...
5
by Carson Holt-2
MAKER3 beta - EVM under predicting by Tuan Duong
1
by Carson Holt-2
about min_protein by Quanwei Zhang
3
by Carson Holt-2
Question about "maker-", "augustus_masked", "snap_masked" gene model by Quanwei Zhang
1
by Carson Holt-2
Some errors reported by Maker2 by Quanwei Zhang
21
by Quanwei Zhang
OpenMPI issues, no response in two attempts to subscribe to list by mathog
1
by Carson Holt-2
Repeats annotation by Quanwei Zhang
1
by Carson Holt-2
MSG: Can't get HSPs: data not collected. by zl c
2
by Carson Holt-2
ERROR: Can't call method "start" on an undefined value at ../lib/maker/join.pm line 535 by Willett, Christopher...
1
by Carson Holt-2
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