MAKER

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User support and development list for the MAKER genome annotation pipeline. MAKER is a part of the Generic Model Organism Database (GMOD) project.

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Topics (1189)
Replies Last Post Views
Fungal genome annotation by Linnie Linnie
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by Linnie Linnie
Re: maker-devel post from david.hughes@rothamsted.ac.uk requires approval by Carson Holt-2
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by David Hughes
MAKER v3.0.0. by David Hughes
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by David Hughes
GMOD codefest before PAG by Scott Cain
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by Scott Cain
How to make maker output into another directory by Emmanuel Nnadi
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by Carson Holt-2
Maker installation fails for MacOSX by Katherine Balasingha...
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by Carson Holt-2
/perl/lib/auto/Acme/Damn/Damn.so: undefined symbol: Perl_xs_apiversion_bootcheck by Emmanuel Nnadi
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by Carson Holt-2
Maker decision of genes when having a long transcript over several proteins by Qihua Liang
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by Carson Holt-2
Maker decision of genes when having a long transcript over several proteins by Qihua Liang
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by Qihua Liang
Trouble with EVM and evidence from external GFF3 by Cédric Cabau
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by Cédric Cabau
which files are expected after fasta_merge? by Brandon Pickett
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by Carson Holt-2
Haplotype specific annotations by Boyher, Adam
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by Carson Holt-2
GeneWise in MAKER? by Jacques Dainat-4
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by Jacques Dainat-4
maker_gff parameter - problem when gff contains fasta sequences by Jacques Dainat-4
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by Jacques Dainat-4
maker with mpi support on example still not done after two days by Taslim, Cenny
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by Carson Holt-2
maker predicting only part of a gene by Das, Debojyoti
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by Carson Holt-2
Running maker with suboptimal evidence by Martin, John
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by Carson Holt-2
maker predicting only part of a gene by Debojyoti Das
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by Debojyoti Das
Trouble using custom repeat library w/ Maker v2.31.10 by Martin, John
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by Martin, John
Annotations from high confidence IsoSeq data by DECKER, KEITH F [AG/...
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by Carson Holt-2
Re: Your message to maker-devel awaits moderator approval by Carson Holt-2
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by Carson Holt-2
MAKER caught in loop by Charles Warden
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by Charles Warden
Maker train SNAP: substr outside of string at Carp.pm by Yuna
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by Xabier Vázquez-Campo...
Problems with ipr_update_gff by Eduardo Conrado Souz...
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by Carson Holt-2
substr outside of string at Carp.pm by Bianca Frommer
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by Bianca Frommer
SNAP error in MAKER exon:out_of_bounds by PREETHIBA GOPI-2
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by PREETHIBA GOPI-2
SNAP error in MAKER exon: out_of_bounds by Preethiba Gopi
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by Preethiba Gopi
Statistics about genomes and annotation in 2019 ? by Patrick Tran Van-2
7
by Carson Holt-2
Re: MAKER and tRNAscan by 李青 Li, Qing
1
by Carson Hinton Holt
Failed to run maker after install by Abdulmalek Algarni
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by Carson Holt-2
Re: Maker errors by Carson Hinton Holt
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by Carson Hinton Holt
genome annnotation by maker by djerroud samia
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by djerroud samia
Redundant FASTA headers by Bastian Schiffthaler
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by Carson Holt-2
Running out of time in MAKER by Christian Ayala
2
by Mark Yandell
maker_functional_gff Error by Paul Sheridan
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by Paul Sheridan
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