MAKER

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User support and development list for the MAKER genome annotation pipeline. MAKER is a part of the Generic Model Organism Database (GMOD) project.

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Topics (1109)
Replies Last Post Views
Repeats annotation by Quanwei Zhang
1
by Carson Holt-2
MSG: Can't get HSPs: data not collected. by zl c
2
by Carson Holt-2
ERROR: Can't call method "start" on an undefined value at ../lib/maker/join.pm line 535 by Willett, Christopher...
1
by Carson Holt-2
Processing contig output - MPI job fail by Lahcen Campbell-2
1
by Carson Holt-2
repeats masking by Quanwei Zhang
12
by Carson Holt-2
Processing contig output - MPI job fail by lahcen campbell
0
by lahcen campbell
Maker protein match & tandem similar genes by Tim Fallon
9
by Carson Holt-2
Fwd: Errors with Blast engine and Fasta index by Isabel Marcelino
4
by Ence,daniel
question about FASTA warnings by Willett, Christopher...
2
by Carson Holt-2
basis of gene removed in maker re-annotation by yplee
1
by Carson Holt-2
maker MPI problem by zl c
14
by Carson Holt-2
Fwd: maker MPI problem by Carson Holt-2
0
by Carson Holt-2
maker problem large number of files by zl c
1
by Daniel Ence-2
unsubscribe by Alyce Fowler
0
by Alyce Fowler
Inconsistent RepeatMasker error on draft assembly by Zach Cohen
1
by Carson Holt-2
Problem with MAKER installation by jltan
1
by Carson Holt-2
split_fasta script by Patrick Michael Chiu...
1
by Carson Holt-2
(no subject) by nathan.ricks
2
by Carson Holt-2
Output of fasta_merge by nathan.ricks
1
by Carson Holt-2
BUSCO trained Augustus parameter for MAKER by Arnab Ghosh
2
by Xabier Vázquez Campo...
update the repeatMasker by Quanwei Zhang
1
by Carson Holt-2
MAKER annotation post processing by Patrick Tran Van-2
1
by Michael Campbell
some suggestion by zhushilin@frasergen....
2
by Fields, Christopher ...
Re: Question regarding MAKER by Carson Holt
0
by Carson Holt
Error "Assertion ((sv)->sv_flags &" failed: file "mg.c" by Luiz Augusto Bovolen...
1
by Carson Holt-2
advanced repeat libraries by Xabier Vázquez Campo...
0
by Xabier Vázquez Campo...
Possible ways to improve annotated gene numbers by Qihua Liang
1
by Carson Holt-2
maker with MPI and perl using threads by John Damm Sørensen
4
by Carson Holt-2
Maker annotation of large scaffolds by Aravind PRASAD
6
by Aravind PRASAD
Database disk image is malformed error by Tim Fallon
2
by Tim Fallon
Re: Request a favor regarding MAKER by Carson Holt
0
by Carson Holt
How to address errors encountered in process of submitting genome by Glenna Kramer
3
by Jason Stajich-4
Re: Plant genome annotation by Carson Holt
0
by Carson Holt
multiple overlapped snoRNA genes got annotated by maker by Jia-Xing Yue-2
5
by Jia-Xing Yue-2
maker_functional_gff by nathan.ricks
2
by Carson Holt-2
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