MAKER

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User support and development list for the MAKER genome annotation pipeline. MAKER is a part of the Generic Model Organism Database (GMOD) project.

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Topics (1264)
Replies Last Post Views
Problems with openMPI in multiple computing nodes by Xu, taosheng
1
by Carson Holt-2
Maker 0 genes after SNAP or with proteins.gff by Ricardo Nuno Ferreir...
2
by Carson Holt-2
Trouble in opening the registration page for Maker by 周鑫
0
by 周鑫
maker error-ERROR: Failed while annotating transcripts by 余进(Jin Yu)
0
by 余进(Jin Yu)
different number of annotated genes and transcripts by nmoreyra
0
by nmoreyra
Maker v3.01 change-log + 3'UTR question by Luca Peruzza-2
2
by Luca Peruzza-2
Question about maker. Maker2 failed by 祖尧刘
0
by 祖尧刘
Multiple UTR ? by Patrick Tran Van-2
1
by Patrick Tran Van-2
New assembly annotation by andrei.kiselev
1
by Carson Holt-2
Annotating a fragmented assembly by Lior Glick
1
by Carson Holt-2
Can install but Cannot Run MAKER by xpeng
1
by Carson Holt-2
Question about re-annotation by Thodoris Danis
1
by Carson Holt-2
Maker annotation AED scores are around 0.5 by Wei Zhao
2
by Carson Holt-2
repeatmasker output gff by Homa Papoli
1
by Carson Holt-2
Problem with Maker using GeneMark by Gagné, Patrick (NRCA...
1
by Carson Holt-2
guidance for first and subsequent annotation parameters by Devon O'Rourke
1
by Carson Holt-2
final annotation issues by joel
0
by joel
substr outside of string at .../Carp.pm 346 by Brandon Pickett
0
by Brandon Pickett
maker_functional_gff error "Can't use string ("") as a HASH ref" by Luca Peruzza
0
by Luca Peruzza
CRL_Step2 will not produce required outputs by Emmanuel Nnadi
0
by Emmanuel Nnadi
Maker actions when using importied rm_gff file by Devon O'Rourke
2
by Devon O'Rourke
maker2jbrowse error: Don't know how to format iprscan tracks, skipping by joel
1
by Carson Holt-2
short scaffolds finish, long scaffolds (almost always) fail by Devon O'Rourke
7
by Carson Holt-2
maker_functional_gff error by Gongyuan Cao
0
by Gongyuan Cao
Maker Issue re-annotating by Megan Breitbach
1
by Carson Holt-2
Unassembled RNA-Seq data to Maker by Soomro, Tayab (AAFC/...
2
by Carson Holt-2
Alternative splicing in MAKER by Lior Glick
0
by Lior Glick
Alternative splicing in MAKER by Lior Glick
0
by Lior Glick
Avoiding re-indexing the same file by H.DENISE
1
by Carson Holt-2
Error: FASTA header doesn't match '>(\S+)' by Emily Abernathy
2
by Carson Holt-2
Google Summer of Code by Scott Cain
0
by Scott Cain
Illegal division by zero while polishing ESTs by Ovidiu Paun
1
by Carson Holt-2
Re: maker-devel post from david.carlson@stonybrook.edu requires approval by Carson Holt-2
0
by Carson Holt-2
Maker failing by Boyher, Adam
3
by Carson Holt-2
Maker installation-RepeatMasker (or running RepeatMasker outside maker) by Linnie Linnie
1
by Carson Holt-2
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