MAKER

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User support and development list for the MAKER genome annotation pipeline. MAKER is a part of the Generic Model Organism Database (GMOD) project.

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Topics (1048)
Replies Last Post Views
Possible ways to improve annotated gene numbers by Qihua Liang
1
by Carson Holt-2
maker with MPI and perl using threads by John Damm Sørensen
4
by Carson Holt-2
Maker annotation of large scaffolds by Aravind PRASAD
6
by Aravind PRASAD
Database disk image is malformed error by Tim Fallon
2
by Tim Fallon
Re: Request a favor regarding MAKER by Carson Holt
0
by Carson Holt
How to address errors encountered in process of submitting genome by Glenna Kramer
3
by Jason Stajich-4
Re: Plant genome annotation by Carson Holt
0
by Carson Holt
multiple overlapped snoRNA genes got annotated by maker by Jia-Xing Yue-2
5
by Jia-Xing Yue-2
maker_functional_gff by nathan.ricks
2
by Carson Holt-2
augustus exon calling ~ by Salim Bougouffa
2
by Carson Holt-2
Hyperthreading by System Admin
7
by Carson Holt-2
augustus exon calling ~ by Salim Bougouffa-2
0
by Salim Bougouffa-2
Using mpich2 with Maker by nathan.ricks
1
by Carson Holt-2
Maker gene vs snap match in final GFF's by Marcus Naymik
2
by Ence,daniel
MAKER only running 1 task by Seth_m55
1
by Carson Holt-2
want coding sequences by Quanwei Zhang
1
by Carson Holt-2
advanced repeat masking library constructions & rna-seq assembly choices by Salim Bougouffa
4
by Salim Bougouffa
How to evaluate maker proteins' quality? by dcg@cau.edu.cn
1
by Carson Holt-2
RepeatMasker: NCBIBlastSearchEngine::search: Error by 卢金原Jim
5
by 卢金原Jim
Post Processing of Annotations by nathan.ricks
3
by Carson Holt-2
How to explain the maker results? by dcg@cau.edu.cn
1
by Carson Holt-2
Why my maker get no results? by dcg@cau.edu.cn
1
by Carson Holt-2
Issues with Maker - RepBase by nathan.ricks
1
by Carson Holt-2
altEST evidence by Miche Zacharias
1
by Carson Holt-2
Help with MPI installation and configuration by Tim Fallon
4
by Carson Holt-2
run maker using qsub by Sobel-Sorenson, Chan...
1
by Carson Holt-2
How to run Maker to get the AED? by wangzhennan
1
by Carson Holt-2
Re: maker putting _Inline directory wherever it is run by Carson Holt-2
0
by Carson Holt-2
Re: Some error messages in the output log of Maker by Carson Holt-2
1
by Carson Holt-2
Re: maker-devel post from elyssa_garza@yahoo.com requires approval by Carson Holt-2
0
by Carson Holt-2
merging gff files by Elyssa Garza
0
by Elyssa Garza
Large dataset of RNA-Seq data by Qihua Liang
1
by Carson Holt-2
MAKER RepeatMasker outputs incompatible annotations for single feature by Matt Simenc
1
by Carson Holt-2
RepeatMasker masking olfactory receptors by Annabel Beichman
1
by 4urelie K
Re: non-M gene models by Carson Holt
0
by Carson Holt
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