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MAKER

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User support and development list for the MAKER genome annotation pipeline. MAKER is a part of the Generic Model Organism Database (GMOD) project.

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Topics (971)
Replies Last Post Views
Authorization failed. by Maya Britstein
1
by Barry Moore-2
Maker crash for long chrm. by Vipul Patel
2
by Carson Holt-2
gff file: possible sources by Qihua Liang
1
by Daniel Ence
MAKER/repeatmasker/TRF parsing of long file names by Liudmila Sergeevna M...
1
by Carson Holt-2
/tmp full by Benjamin Rubin
2
by Benjamin Rubin
Unable to train SNAP by Oleg Lovky
2
by Carson Holt-2
Repeat library construction - CRL scripts by Rob Syme
3
by Rob Syme
map_fasta_ids : No mapping available... by chebbi mohamed amine...
3
by Carson Holt-2
Error running MAKER by John Cornelius
5
by Carson Holt-2
error: training genemodel with SNAP and GeneMark & run time to generate AUGUTUS species file by Parul Kudtarkar
3
by Parul Kudtarkar
Re: About split genes problem in Maker annotations by Carson Holt-2
0
by Carson Holt-2
Re: Predictions without evidence by Carson Holt-2
0
by Carson Holt-2
strand of single exon EST from fasta by Jacques Dainat-3
1
by Carson Holt-2
Maker-P by Pierre-Francois Bert
1
by Carson Holt-2
ProtExcluder1.2 Error by chebbi mohamed amine...
5
by jiangn
Last Call for GMOD talks at PAG by Scott Cain
0
by Scott Cain
est_gff input does not provide any gene model by Jacques Dainat-3
3
by Carson Holt-2
InterProScan protein domain & AED physical evidence filtering by Allison Fuiten
2
by Carson Holt-2
Too many genes? by Annabel Beichman
8
by Carson Holt-2
Call for GMOD talks at PAG by Scott Cain
0
by Scott Cain
Filter transcripts to improve annotation quality ? by chebbi mohamed amine...
8
by chebbi mohamed amine...
Combining and merging two Maker annotation gff files ? by chebbi mohamed amine...
6
by Jason Stajich-4
maker -error by johnny wang
1
by Carson Holt-2
Maker regularly fails and just lost all of the previous work! by Mark Ebbert-2
3
by Carson Holt-2
Re: question about Maker2 by Carson Holt
1
by Carson Holt
Maker MPI installation error and IO error for serial version by Aravind PRASAD
1
by Carson Holt-2
ATG strict start codon usage query by Robert King (RRes-Ro...
1
by Carson Holt-2
should EST evidence be cleaned, assembled? by Steven Sullivan
1
by Carson Holt-2
mapping cDNA to updated genome by Prashant S Hosmani
3
by Prashant S Hosmani
evidence for MAKER vs evidence to train gene finders by Steven Sullivan
5
by Carson Holt-2
questions about post-processing of annotations by Xabier Vázquez Campo...
5
by Carson Holt-2
(no subject) by Mark Ebbert
5
by Carson Holt-2
General question about RNA evidence by Steven Sullivan
1
by Carson Holt-2
MAKER mpi install Error by eaalvarado
1
by Carson Holt-2
antisense RNA in training set? by Steven Sullivan
2
by Steven Sullivan
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