MAKER

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User support and development list for the MAKER genome annotation pipeline. MAKER is a part of the Generic Model Organism Database (GMOD) project.

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Topics (1087)
Replies Last Post Views
principles of re-running MAKER by Jamie
0
by Jamie
Maker performance tuning by Walts,Brandon M
4
by Barry Moore-3
maker_opts.ctl by Freeman, Robert M.
1
by Marvin B Moore
FW: MAKER Genes Correspondence Question by Mark Yandell
1
by Carson Holt-2
maker2zff by Freeman, Robert M.
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by Freeman, Robert M.
Re: Maker running with tRNAScan and Interpro by Carson Holt-2
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by Carson Holt-2
Training Augustus by claudia
2
by Jason Stajich-4
Re: Training SNAP in absense of ESTs? by Carson Holt
1
by Khan, Anar
Training SNAP by claudia
1
by Carson Holt-2
training SNAP with ests and cegma proteins by claudia
7
by Marvin B Moore
training snap with ests and cegma proteins by Claudia-2
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by Claudia-2
est2genome option by Felix Bemm
1
by Carson Holt
Masked genes by Daniel Standage
1
by Carson Holt-2
Re: MWAS: User Feedback by Carson Holt
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by Carson Holt
Re: Maker running with tRNAScan and Interpro by Carson Holt
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by Carson Holt
Training SNAP in absense of ESTs? by Khan, Anar
5
by Khan, Anar
Maker producing invalid gff3 files by filipegoncalo
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by jim.hu.biobio
Maker is not working properly, don't know what else to do by filipegoncalo
1
by Carson Holt
Question about augustus/blat by Shane Brubaker-2
1
by Carson Holt
Maker vs blast by filipegoncalo
2
by Carson Holt
maker_2.10 hangs after completion with mpich2 by Greg Taylor
5
by Carson Holt
GeneMark-ES problem by 朱英杰
3
by Carson Holt
iteratively running maker... by Jamie
2
by Carson Holt
single_exon parameter by Khan, Anar
1
by Carson Holt
Maker analysis by Intikhab
1
by Carson Holt
Problem with Maker by filipegoncalo
2
by Carson Holt
Problem on Repeat Masker by filipegoncalo
1
by filipegoncalo
Problem with Maker/RepeatMasker by filipegoncalo
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by filipegoncalo
Ran into unknown state (hex char: 29) at /home/a200302/maker-2.10/lib/File/..//Proc/Signal.pm line 94. by Phil
1
by Carson Holt
Just a "simple" question by filipegoncalo
3
by Marvin B Moore
intron size - 10k to much? by Phil
1
by Carson Holt
Restarting a crashed run by Khan, Anar
2
by Khan, Anar
"lock" follow up... by Jamie
0
by Jamie
Re: maker-devel Digest, Vol 36, Issue 14 by Jamie
0
by Jamie
using maker_functional_gff with other dbs by claudia
1
by Carson Holt
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