SNP prioritization pipelines

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SNP prioritization pipelines

Radhouane Aniba
Hi Galaxy users,

I am new to Galaxy, I am exploring the screencasts over your website, I would like to know if it is possible to deal with yet unseen example in your website.

I downloaded NHGRI GWAS data table and I am interested in a given traits/complex diseases.

Is it possible to build a workflow on SNPs prioritization using galaxy ? Does anyone already did this ?

Thanks

Rad



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Re: SNP prioritization pipelines

Anton Nekrutenko
Dear Rad:

We do not yet have all necessary tools for making up such as workflow.

Thanks for using Galaxy,

anton
galaxy team


Anton Nekrutenko
http://nekrut.bx.psu.edu
http://usegalaxy.org



On Jun 7, 2011, at 12:07 PM, Radhouane Aniba wrote:

> Hi Galaxy users,
>
> I am new to Galaxy, I am exploring the screencasts over your website, I would like to know if it is possible to deal with yet unseen example in your website.
>
> I downloaded NHGRI GWAS data table and I am interested in a given traits/complex diseases.
>
> Is it possible to build a workflow on SNPs prioritization using galaxy ? Does anyone already did this ?
>
> Thanks
>
> Rad
>
>
> ___________________________________________________________
> The Galaxy User list should be used for the discussion of
> Galaxy analysis and other features on the public server
> at usegalaxy.org.  Please keep all replies on the list by
> using "reply all" in your mail client.  For discussion of
> local Galaxy instances and the Galaxy source code, please
> use the Galaxy Development list:
>
>  http://lists.bx.psu.edu/listinfo/galaxy-dev
>
> To manage your subscriptions to this and other Galaxy lists,
> please use the interface at:
>
>  http://lists.bx.psu.edu/


___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

  http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

  http://lists.bx.psu.edu/