StackOverflowError when open aspect pages

[Chen Yi-an]

Hi all,

After upgrade to version 0.98, I got some troubles when trying to open
any one of the aspect page within the "Data" tab.

Following are the error logs:

2011-11-01 18:24:52 ERROR org.apache.struts.tiles.taglib.InsertTag     -
ServletException in '/aspectPopup.jsp': null
javax.servlet.ServletException
         at
org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:140)
         at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
         at
org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
         at
org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
         at
org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
         at
org.apache.jsp.tag.web.box_tag._jspx_meth_tiles_005finsert_005f0(box_tag.java:362)
         at
org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fwhen_005f0(box_tag.java:336)
         at
org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fchoose_005f0(box_tag.java:302)
         at
org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fif_005f1(box_tag.java:250)
         at org.apache.jsp.tag.web.box_tag.doTag(box_tag.java:162)
         at
org.apache.jsp.aspect_jsp._jspx_meth_im_005fbox_005f0(aspect_jsp.java:228)
         at org.apache.jsp.aspect_jsp._jspService(aspect_jsp.java:146)
         at
org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
         at
org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
         at
org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
         at
org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
         at
org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
         at
org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
         at
org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
         at
org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
         at
org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
         at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
         at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
         at java.lang.reflect.Method.invoke(Method.java:597)
         at
org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
         at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
         at
org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
         at
org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
         at
org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
         at
org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
         at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
         at
org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
         at
org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
         at
org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
         at
org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
         at
org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
         at
org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
         at
org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
         at
org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
         at
org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
          at
org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
         at
org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
         at
org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
         at
org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
         at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
         at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
         at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
         at
org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
         at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
         at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
         at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
         at
org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
         at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
         at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
         at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
         at java.lang.Thread.run(Thread.java:619)

There is another error log:

2011-11-01 18:24:53 ERROR org.apache.struts.tiles.taglib.InsertTag     -
ServletException in '/aspect.jsp': javax.servlet.jsp.JspException:
ServletException i
n '/aspectPopup.jsp': null
org.apache.jasper.JasperException: Exception in JSP: /aspect.jsp:51

48: <tiles:importAttribute name="aspect" scope="request"/>
49: <tiles:importAttribute name="startingPoints"/>
50:
51: <im:box title="${aspect.name}" topRightTile="/aspectPopup.jsp">
52:
53: <c:if test="${!empty aspect.aspectSources}">
54: <div class="aspectSources">


Stacktrace:
         at
org.apache.jasper.servlet.JspServletWrapper.handleJspException(JspServletWrapper.java:467)
         at
org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:371)
         at
org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
         at
org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
         at
org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
         at
org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
         at
org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
         at
org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
         at
org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
         at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
         at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
         at java.lang.reflect.Method.invoke(Method.java:597)
         at
org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
         at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
         at
org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
         at
org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
         at
org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
         at
org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
         at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
         at
org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
         at
org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
         at
org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
         at
org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
         at
org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
         at
org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
         at
org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
         at
org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
         at
org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
         at
org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
         at
org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
         at
org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
         at
org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
         at
org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
         at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
         at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
         at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
         at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
         at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
         at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
         at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
         at
org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
         at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
         at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
         at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
         at
org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
         at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
         at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
         at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
         at java.lang.Thread.run(Thread.java:619)

Finally I got StackOverflowError...
at
org.apache.jasper.runtime.JspContextWrapper.include(JspContextWrapper.java:289)

Looks like an endless loop.

Any comment?
Thanks in advance.

With best wishes,

Chen


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[Julie Sullivan]

Hi Chen

Can you try updating your checkout and re-releasing your webapp?

I've checked in a fix for the endless loop.  We should then see what the real
error message is.  Let me know what you find.

If it's on the aspects page, it might be because it couldn't find the aspect in
the 'aspects.xml' file (in webapp/resources/webapp/WEB_INF).  Just guessing though.

Cheers
Julie

On 01/11/11 10:28, Chen Yian wrote:

> Hi all,
>
> After upgrade to version 0.98, I got some troubles when trying to open any one
> of the aspect page within the "Data" tab.
>
> Following are the error logs:
>
> 2011-11-01 18:24:52 ERROR org.apache.struts.tiles.taglib.InsertTag -
> ServletException in '/aspectPopup.jsp': null
> javax.servlet.ServletException
> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:140)
> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
> at
> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
> at
> org.apache.jsp.tag.web.box_tag._jspx_meth_tiles_005finsert_005f0(box_tag.java:362)
> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fwhen_005f0(box_tag.java:336)
> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fchoose_005f0(box_tag.java:302)
> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fif_005f1(box_tag.java:250)
> at org.apache.jsp.tag.web.box_tag.doTag(box_tag.java:162)
> at org.apache.jsp.aspect_jsp._jspx_meth_im_005fbox_005f0(aspect_jsp.java:228)
> at org.apache.jsp.aspect_jsp._jspService(aspect_jsp.java:146)
> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
>
> at org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
> at org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
> at org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
> at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>
> at java.lang.reflect.Method.invoke(Method.java:597)
> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
> at
> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
> at org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
> at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
>
> at org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
> at
> org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
>
> at
> org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
>
> at
> org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
>
> at
> org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
> at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
> at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
> at org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
> at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
> at
> org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
>
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
> at
> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
>
> at
> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
> at
> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
>
> at
> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
> at java.lang.Thread.run(Thread.java:619)
>
> There is another error log:
>
> 2011-11-01 18:24:53 ERROR org.apache.struts.tiles.taglib.InsertTag -
> ServletException in '/aspect.jsp': javax.servlet.jsp.JspException:
> ServletException i
> n '/aspectPopup.jsp': null
> org.apache.jasper.JasperException: Exception in JSP: /aspect.jsp:51
>
> 48: <tiles:importAttribute name="aspect" scope="request"/>
> 49: <tiles:importAttribute name="startingPoints"/>
> 50:
> 51: <im:box title="${aspect.name}" topRightTile="/aspectPopup.jsp">
> 52:
> 53: <c:if test="${!empty aspect.aspectSources}">
> 54: <div class="aspectSources">
>
>
> Stacktrace:
> at
> org.apache.jasper.servlet.JspServletWrapper.handleJspException(JspServletWrapper.java:467)
>
> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:371)
> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
>
> at org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
> at org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
> at org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
> at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>
> at java.lang.reflect.Method.invoke(Method.java:597)
> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
> at
> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
> at org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
> at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
>
> at
> org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
>
> at org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
> at
> org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
>
> at
> org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
>
> at
> org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
>
> at
> org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
> at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
> at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
> at org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
>
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
> at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
> at
> org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
>
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
> at
> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
>
> at
> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
> at
> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
>
> at
> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
> at java.lang.Thread.run(Thread.java:619)
>
> Finally I got StackOverflowError...
> at org.apache.jasper.runtime.JspContextWrapper.include(JspContextWrapper.java:289)
>
> Looks like an endless loop.
>
> Any comment?
> Thanks in advance.
>
> With best wishes,
>
> Chen
>
>
> _______________________________________________
> dev mailing list
> [hidden email]
> http://mail.intermine.org/cgi-bin/mailman/listinfo/dev
>

_______________________________________________
dev mailing list
[hidden email]
http://mail.intermine.org/cgi-bin/mailman/listinfo/dev

[Chen Yi-an]

Hi Julie,

I've updated my code to the latest version, but I'm afraid the problem
is still there.
I think the setting for 'aspects.xml' should be correct, because it
worked fine before (version 0.96).

Since I got the stack overflow by several different situation, I guess
the problem may be the system itself.
Finally, I found that when I deploy the system to my windows machine
which runs tomcat 5.5.34, the problem seems disappeared.
I think the problem may be the version of tomcat, while our server is
still running tomcat 5.5.23 which is quit out of date.

I'll try upgrading our server later to see how it works.

Thanks for your replying.

Best,

Chen


(2011/11/01 19:49), [hidden email] wrote:

> Date: Tue, 01 Nov 2011 10:49:03 +0000
> From: Julie Sullivan<[hidden email]>
> To: [hidden email]
> Subject: Re: [InterMine Dev] StackOverflowError when open aspect pages
> Message-ID:<[hidden email]>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> Hi Chen
>
> Can you try updating your checkout and re-releasing your webapp?
>
> I've checked in a fix for the endless loop.  We should then see what the real
> error message is.  Let me know what you find.
>
> If it's on the aspects page, it might be because it couldn't find the aspect in
> the 'aspects.xml' file (in webapp/resources/webapp/WEB_INF).  Just guessing though.
>
> Cheers
> Julie
>
> On 01/11/11 10:28, Chen Yian wrote:
>> Hi all,
>>
>> After upgrade to version 0.98, I got some troubles when trying to open any one
>> of the aspect page within the "Data" tab.
>>
>> Following are the error logs:
>>
>> 2011-11-01 18:24:52 ERROR org.apache.struts.tiles.taglib.InsertTag -
>> ServletException in '/aspectPopup.jsp': null
>> javax.servlet.ServletException
>> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:140)
>> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
>> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
>> at
>> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
>> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
>> at
>> org.apache.jsp.tag.web.box_tag._jspx_meth_tiles_005finsert_005f0(box_tag.java:362)
>> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fwhen_005f0(box_tag.java:336)
>> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fchoose_005f0(box_tag.java:302)
>> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fif_005f1(box_tag.java:250)
>> at org.apache.jsp.tag.web.box_tag.doTag(box_tag.java:162)
>> at org.apache.jsp.aspect_jsp._jspx_meth_im_005fbox_005f0(aspect_jsp.java:228)
>> at org.apache.jsp.aspect_jsp._jspService(aspect_jsp.java:146)
>> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
>>
>> at org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
>> at org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
>> at org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
>> at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
>> at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>
>> at java.lang.reflect.Method.invoke(Method.java:597)
>> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
>> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
>> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
>> at
>> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
>> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
>> at org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
>> at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
>> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
>>
>> at org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
>> at
>> org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
>>
>> at
>> org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
>>
>> at
>> org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
>>
>> at
>> org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
>> at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
>> at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
>> at org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
>> at
>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
>> at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
>> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
>> at
>> org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
>>
>> at
>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
>> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
>> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
>> at
>> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
>>
>> at
>> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
>> at
>> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
>>
>> at
>> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
>> at java.lang.Thread.run(Thread.java:619)
>>
>> There is another error log:
>>
>> 2011-11-01 18:24:53 ERROR org.apache.struts.tiles.taglib.InsertTag -
>> ServletException in '/aspect.jsp': javax.servlet.jsp.JspException:
>> ServletException i
>> n '/aspectPopup.jsp': null
>> org.apache.jasper.JasperException: Exception in JSP: /aspect.jsp:51
>>
>> 48:<tiles:importAttribute name="aspect" scope="request"/>
>> 49:<tiles:importAttribute name="startingPoints"/>
>> 50:
>> 51:<im:box title="${aspect.name}" topRightTile="/aspectPopup.jsp">
>> 52:
>> 53:<c:if test="${!empty aspect.aspectSources}">
>> 54:<div class="aspectSources">
>>
>>
>> Stacktrace:
>> at
>> org.apache.jasper.servlet.JspServletWrapper.handleJspException(JspServletWrapper.java:467)
>>
>> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:371)
>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
>>
>> at org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
>> at org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
>> at org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
>> at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
>> at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>
>> at java.lang.reflect.Method.invoke(Method.java:597)
>> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
>> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
>> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
>> at
>> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
>> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
>> at org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
>> at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
>> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
>>
>> at
>> org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
>>
>> at org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
>> at
>> org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
>>
>> at
>> org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
>>
>> at
>> org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
>>
>> at
>> org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
>> at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
>> at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
>> at org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
>>
>> at
>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>
>> at
>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
>> at
>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
>> at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
>> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
>> at
>> org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
>>
>> at
>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
>> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
>> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
>> at
>> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
>>
>> at
>> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
>> at
>> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
>>
>> at
>> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
>> at java.lang.Thread.run(Thread.java:619)
>>
>> Finally I got StackOverflowError...
>> at org.apache.jasper.runtime.JspContextWrapper.include(JspContextWrapper.java:289)
>>
>> Looks like an endless loop.
>>
>> Any comment?
>> Thanks in advance.
>>
>> With best wishes,
>>
>> Chen
>>
>>
>> _______________________________________________
>> dev mailing list
>> [hidden email]
>> http://mail.intermine.org/cgi-bin/mailman/listinfo/dev
>>
>
>
> ------------------------------
>
> _______________________________________________
> dev mailing list
> [hidden email]
> http://mail.intermine.org/cgi-bin/mailman/listinfo/dev
>
>
> End of dev Digest, Vol 30, Issue 1
> **********************************
>

_______________________________________________
dev mailing list
[hidden email]
http://mail.intermine.org/cgi-bin/mailman/listinfo/dev

[Julie Sullivan]

Thanks Chen, let me know how that goes.

On 02/11/11 09:35, Chen Yian wrote:
> Hi Julie,
>
> I've updated my code to the latest version, but I'm afraid the problem is still
> there.
> I think the setting for 'aspects.xml' should be correct, because it worked fine
> before (version 0.96).

InterMine 0.96 was released in February.  We've done a great deal of adding and
updating code since then, I wouldn't be surprised if there were some issues!

> Since I got the stack overflow by several different situation, I guess the
> problem may be the system itself.

True.  I do know that we have a known bug that can cause this problem.  The page
that renders error message includes the header code.  This is fine, it makes the
page look nice.  However if the error *itself* is in the header code (htmlHead),
it causes an infinite loop.

eg. the header code throws an error, which brings up the error page, which runs
the header code which throws an error ...

This is now fixed in the 0.98 branch here:

        http://intermine.org/changeset/28299/branches/intermine_0_98

Or so I thought!  I'd be interested to see your error messages after you applied
this patch.

> Finally, I found that when I deploy the system to my windows machine which runs
> tomcat 5.5.34, the problem seems disappeared.
> I think the problem may be the version of tomcat, while our server is still
> running tomcat 5.5.23 which is quit out of date.
>
> I'll try upgrading our server later to see how it works.

Thanks, let us know.  Our production servers run 6.0.29 and 6.0.32, I am not
sure we have tested the latest InterMine software on Tomcat 5.

> Thanks for your replying.
>
> Best,
>
> Chen
>
>
> (2011/11/01 19:49), [hidden email] wrote:
>> Date: Tue, 01 Nov 2011 10:49:03 +0000
>> From: Julie Sullivan<[hidden email]>
>> To: [hidden email]
>> Subject: Re: [InterMine Dev] StackOverflowError when open aspect pages
>> Message-ID:<[hidden email]>
>> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>>
>> Hi Chen
>>
>> Can you try updating your checkout and re-releasing your webapp?
>>
>> I've checked in a fix for the endless loop. We should then see what the real
>> error message is. Let me know what you find.
>>
>> If it's on the aspects page, it might be because it couldn't find the aspect in
>> the 'aspects.xml' file (in webapp/resources/webapp/WEB_INF). Just guessing
>> though.
>>
>> Cheers
>> Julie
>>
>> On 01/11/11 10:28, Chen Yian wrote:
>>> Hi all,
>>>
>>> After upgrade to version 0.98, I got some troubles when trying to open any one
>>> of the aspect page within the "Data" tab.
>>>
>>> Following are the error logs:
>>>
>>> 2011-11-01 18:24:52 ERROR org.apache.struts.tiles.taglib.InsertTag -
>>> ServletException in '/aspectPopup.jsp': null
>>> javax.servlet.ServletException
>>> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:140)
>>> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
>>> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
>>> at
>>> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
>>>
>>> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
>>> at
>>> org.apache.jsp.tag.web.box_tag._jspx_meth_tiles_005finsert_005f0(box_tag.java:362)
>>>
>>> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fwhen_005f0(box_tag.java:336)
>>> at
>>> org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fchoose_005f0(box_tag.java:302)
>>> at org.apache.jsp.tag.web.box_tag._jspx_meth_c_005fif_005f1(box_tag.java:250)
>>> at org.apache.jsp.tag.web.box_tag.doTag(box_tag.java:162)
>>> at org.apache.jsp.aspect_jsp._jspx_meth_im_005fbox_005f0(aspect_jsp.java:228)
>>> at org.apache.jsp.aspect_jsp._jspService(aspect_jsp.java:146)
>>> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
>>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>>> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
>>>
>>>
>>> at
>>> org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
>>> at org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
>>> at org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
>>> at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
>>> at
>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>>
>>>
>>> at java.lang.reflect.Method.invoke(Method.java:597)
>>> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
>>> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
>>> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
>>> at
>>> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
>>>
>>> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
>>> at
>>> org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
>>> at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
>>> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
>>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
>>>
>>>
>>> at
>>> org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
>>> at
>>> org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
>>>
>>>
>>> at
>>> org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
>>>
>>>
>>> at
>>> org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
>>>
>>>
>>> at
>>> org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
>>>
>>> at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
>>> at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
>>> at org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
>>>
>>> at
>>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
>>>
>>> at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
>>> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
>>> at
>>> org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
>>>
>>>
>>> at
>>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
>>>
>>> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
>>> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
>>> at
>>> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
>>>
>>>
>>> at
>>> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
>>>
>>> at
>>> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
>>>
>>>
>>> at
>>> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
>>>
>>> at java.lang.Thread.run(Thread.java:619)
>>>
>>> There is another error log:
>>>
>>> 2011-11-01 18:24:53 ERROR org.apache.struts.tiles.taglib.InsertTag -
>>> ServletException in '/aspect.jsp': javax.servlet.jsp.JspException:
>>> ServletException i
>>> n '/aspectPopup.jsp': null
>>> org.apache.jasper.JasperException: Exception in JSP: /aspect.jsp:51
>>>
>>> 48:<tiles:importAttribute name="aspect" scope="request"/>
>>> 49:<tiles:importAttribute name="startingPoints"/>
>>> 50:
>>> 51:<im:box title="${aspect.name}" topRightTile="/aspectPopup.jsp">
>>> 52:
>>> 53:<c:if test="${!empty aspect.aspectSources}">
>>> 54:<div class="aspectSources">
>>>
>>>
>>> Stacktrace:
>>> at
>>> org.apache.jasper.servlet.JspServletWrapper.handleJspException(JspServletWrapper.java:467)
>>>
>>>
>>> at
>>> org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:371)
>>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>>> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:594)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:505)
>>>
>>>
>>> at
>>> org.apache.jasper.runtime.JspRuntimeLibrary.include(JspRuntimeLibrary.java:965)
>>> at org.apache.jasper.runtime.PageContextImpl.doInclude(PageContextImpl.java:634)
>>> at org.apache.jasper.runtime.PageContextImpl.include(PageContextImpl.java:628)
>>> at sun.reflect.GeneratedMethodAccessor244.invoke(Unknown Source)
>>> at
>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>>
>>>
>>> at java.lang.reflect.Method.invoke(Method.java:597)
>>> at org.apache.struts.tiles.TilesUtilImpl.doInclude(TilesUtilImpl.java:129)
>>> at org.apache.struts.tiles.TilesUtil.doInclude(TilesUtil.java:152)
>>> at org.apache.struts.tiles.taglib.InsertTag.doInclude(InsertTag.java:764)
>>> at
>>> org.apache.struts.tiles.taglib.InsertTag$InsertHandler.doEndTag(InsertTag.java:896)
>>>
>>> at org.apache.struts.tiles.taglib.InsertTag.doEndTag(InsertTag.java:465)
>>> at
>>> org.apache.jsp.layout_jsp._jspx_meth_tiles_005fget_005f1(layout_jsp.java:1077)
>>> at org.apache.jsp.layout_jsp._jspService(layout_jsp.java:260)
>>> at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:328)
>>> at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:315)
>>> at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:691)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:469)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:403)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:301)
>>>
>>>
>>> at
>>> org.apache.struts.action.RequestProcessor.doForward(RequestProcessor.java:1083)
>>> at
>>> org.apache.struts.tiles.TilesRequestProcessor.doForward(TilesRequestProcessor.java:295)
>>>
>>>
>>> at
>>> org.apache.struts.tiles.TilesRequestProcessor.processTilesDefinition(TilesRequestProcessor.java:271)
>>>
>>>
>>> at
>>> org.apache.struts.tiles.TilesRequestProcessor.internalModuleRelativeForward(TilesRequestProcessor.java:370)
>>>
>>>
>>> at
>>> org.apache.struts.action.RequestProcessor.processForward(RequestProcessor.java:566)
>>>
>>> at org.apache.struts.action.RequestProcessor.process(RequestProcessor.java:212)
>>> at org.apache.struts.action.ActionServlet.process(ActionServlet.java:1913)
>>> at org.apache.struts.action.ActionServlet.doGet(ActionServlet.java:449)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:690)
>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> com.planetj.servlet.filter.compression.CompressingFilter.doFilter(CompressingFilter.java:270)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
>>>
>>>
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>
>>>
>>> at
>>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:210)
>>>
>>> at
>>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
>>>
>>> at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
>>> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
>>> at
>>> org.apache.catalina.valves.FastCommonAccessLogValve.invoke(FastCommonAccessLogValve.java:482)
>>>
>>>
>>> at
>>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
>>>
>>> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
>>> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
>>> at
>>> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
>>>
>>>
>>> at
>>> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
>>>
>>> at
>>> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
>>>
>>>
>>> at
>>> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:685)
>>>
>>> at java.lang.Thread.run(Thread.java:619)
>>>
>>> Finally I got StackOverflowError...
>>> at
>>> org.apache.jasper.runtime.JspContextWrapper.include(JspContextWrapper.java:289)
>>>
>>> Looks like an endless loop.
>>>
>>> Any comment?
>>> Thanks in advance.
>>>
>>> With best wishes,
>>>
>>> Chen
>>>
>>>
>>> _______________________________________________
>>> dev mailing list
>>> [hidden email]
>>> http://mail.intermine.org/cgi-bin/mailman/listinfo/dev
>>>
>>
>>
>> ------------------------------
>>
>> _______________________________________________
>> dev mailing list
>> [hidden email]
>> http://mail.intermine.org/cgi-bin/mailman/listinfo/dev
>>
>>
>> End of dev Digest, Vol 30, Issue 1
>> **********************************
>>
>
>
> _______________________________________________
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[Chen Yi-an]

Hi Julie,

I tried tomcat 5.5.34 on our server and the system worked fine.
I've never got an exception about stack overflow anymore.

But there were some problems when undeploying the web application.
There are always some temporary files which are locked
and could cause the folder not able to be deleted completely.
I'm not sure but maybe it's tomcat 5.5 's problem.

Finally, I changed to tomcat 6.0.33, everything look fine now.

About the aspect pages, I can open it without any error now,
but the icons before the template are blinking and the templates are not
able to be clicked.

Best,

Chen


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