Updating RatMine 0.94.1

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Updating RatMine 0.94.1

Vallejos, Andrew

[intermine@stearman scripts]$ perl ./update_to_0.94 paths

Backing up /home/intermine/build/ratmine_current/ratmine/dbmodel/resources/genomic_keyDefs.properties to /home/intermine/build/ratmine_current/ratmine/dbmodel/resources/genomic_keyDefs.properties.orig

Can't use an undefined value as a HASH reference at /usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi/Moose/Meta/Attribute/Native/MethodProvider/Hash.pm line 10, <$INFH> line 25.

Path update failed 2304 at ./update_to_0.94 line 57.

[intermine@stearman scripts]$ less ~/AV2intermine_update.0.94.log

Oct 15 15:01:41 [INFO] Processing file /home/intermine/build/ratmine_current/ratmine/dbmodel/resources/genomic_keyDefs.properties

Oct 15 15:04:45 [INFO] Processing file /home/intermine/build/ratmine_current/ratmine/dbmodel/resources/genomic_keyDefs.properties

Oct 15 15:05:22 [INFO] Processing file /home/intermine/build/ratmine_current/ratmine/dbmodel/resources/genomic_keyDefs.properties

(END)

 

I tried updating RatMine again.  Everything went well, until I tried to update the paths.  Above I have the results of running the update script as well as the log file.

 

-Andrew

 

======================

Andrew Vallejos

Web Developer II

Biotechnology and Bioengineering Center

Medical College of Wisconsin

414-955-4104

[hidden email]

 


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