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WebGBrowse server error

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Casey McGrath

WebGBrowse server error

Hi,

I have successfully used WebGBrowse before, but I uploaded a new dataset earlier tonight. The email I received with the link to my dataset is below. When I click on the first link, it tries to load for a while but then I get a 500 Internal Server error (see below).

Can you help me figure out what is going wrong?

Thanks,

Casey

Internal Server Error

The server encountered an internal error or misconfiguration and was unable to complete your request.

Please contact the server administrator, webmaster@localhost and inform them of the time the error occurred, and anything you might have done that may have caused the error.

More information about this error may be available in the server error log.

Apache/2.2.8 (Ubuntu) mod_perl/2.0.3 Perl/v5.8.8 Server at webgbrowse2.cgb.indiana.edu Port 80

---------- Forwarded message ----------
From: <[hidden email]>
Date: Wed, Sep 11, 2013 at 9:04 PM
Subject: [WebGBrowse] caudatum
To: [hidden email]

Dear WebGBrowse user,
Your dataset (caudatum) is successfully configured and hosted by WebGBrowse. You can view your GBrowse display by copying and pasting the following URL in your browser.
http://webgbrowse2.cgb.indiana.edu/cgi-bin/gb2/gbrowse/57ac9f760a41c5b3f0e5e6f9bf78650e/

You can also view your previous datasets using the URL below.

http://webgbrowse.cgb.indiana.edu/cgi-bin/showHistory?ead=3ca371a2ab54fdbbbf135176f14474e2

If you have any questions or suggestions, please contact [hidden email]. Thanks for using WebGBrowse.

WebGBrowse Development Team
Center for Genomics and Bioinformatics
Indiana University

--
_____________________________
Casey McGrath
Graduate Student
Dept. of Biology, Indiana University
Lynch Lab
1001 E. 3rd St.
Bloomington, Indiana 47405
(812) 856-0115

------------------------------------------------------------------------------
How ServiceNow helps IT people transform IT departments:
1. Consolidate legacy IT systems to a single system of record for IT
2. Standardize and globalize service processes across IT
3. Implement zero-touch automation to replace manual, redundant tasks
http://pubads.g.doubleclick.net/gampad/clk?id=51271111&iu=/4140/ostg.clktrk
_______________________________________________
Gmod-webgbrowse mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-webgbrowse

Ram Podicheti-2

Re: WebGBrowse server error

Casey,

There were some nfs related issues a little while ago which must have caused the error. I conducted a test run and couldn't reproduce the error. Please let me know if you are still having difficulties.

Thanks,

Ram Podicheti

On Sep 11, 2013, at 9:18 PM, Casey McGrath wrote:

Hi,
I have successfully used WebGBrowse before, but I uploaded a new dataset earlier tonight. The email I received with the link to my dataset is below. When I click on the first link, it tries to load for a while but then I get a 500 Internal Server error (see below).

Can you help me figure out what is going wrong?

Thanks,

Casey

Internal Server Error

The server encountered an internal error or misconfiguration and was unable to complete your request.

Please contact the server administrator, webmaster@localhost and inform them of the time the error occurred, and anything you might have done that may have caused the error.

More information about this error may be available in the server error log.

Apache/2.2.8 (Ubuntu) mod_perl/2.0.3 Perl/v5.8.8 Server at webgbrowse2.cgb.indiana.edu Port 80

---------- Forwarded message ----------
From: <[hidden email]>
Date: Wed, Sep 11, 2013 at 9:04 PM
Subject: [WebGBrowse] caudatum
To: [hidden email]

Dear WebGBrowse user,
Your dataset (caudatum) is successfully configured and hosted by WebGBrowse. You can view your GBrowse display by copying and pasting the following URL in your browser.
http://webgbrowse2.cgb.indiana.edu/cgi-bin/gb2/gbrowse/57ac9f760a41c5b3f0e5e6f9bf78650e/

You can also view your previous datasets using the URL below.

http://webgbrowse.cgb.indiana.edu/cgi-bin/showHistory?ead=3ca371a2ab54fdbbbf135176f14474e2

If you have any questions or suggestions, please contact [hidden email]. Thanks for using WebGBrowse.

WebGBrowse Development Team
Center for Genomics and Bioinformatics
Indiana University

--
_____________________________
Casey McGrath
Graduate Student
Dept. of Biology, Indiana University
Lynch Lab
1001 E. 3rd St.
Bloomington, Indiana 47405
(812) 856-0115

------------------------------------------------------------------------------
How ServiceNow helps IT people transform IT departments:
1. Consolidate legacy IT systems to a single system of record for IT
2. Standardize and globalize service processes across IT
3. Implement zero-touch automation to replace manual, redundant tasks
http://pubads.g.doubleclick.net/gampad/clk?id=51271111&iu=/4140/ostg.clktrk_______________________________________________
Gmod-webgbrowse mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-webgbrowse