[biomart-users] Error when running getBM

classic Classic list List threaded Threaded
2 messages Options
Reply | Threaded
Open this post in threaded view
|

[biomart-users] Error when running getBM

Gege Gui
<!DOCTYPE HTML PUBLIC -//IETF//DTD HTML 2.0//EN>
1                                                                                                                                       <html><head>
2                                                                                                                           <title>302 Found</title>
3                                                                                                                                      </head><body>
4                                                                                                                                     <h1>Found</h1>
5 <p>The document has moved <a href=//useast.ensembl.org/biomart/martservice?;redirectsrc=//www.ensembl.org%2Fbiomart%2Fmartservice%3F>here</a>.</p>
6                                                                                                                                     </body></html>
Error in getBM(attributes = c("ensembl_gene_id", "start_position", "end_position"),  : 
  The query to the BioMart webservice returned an invalid result: the number of columns in the result table does not equal the number of attributes in the query. Please report this to the mailing list.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.
Reply | Threaded
Open this post in threaded view
|

Re: [biomart-users] Error when running getBM

Thomas Maurel
Hello,

This problem has now been fixed, it will take few days to propagate. Please see following thread for more information: https://support.bioconductor.org/p/104069/#104103

Hope this helps,
Kind Regards,
Thomas

On 12 Dec 2017, at 17:59, Gege Gui <[hidden email]> wrote:

<!DOCTYPE HTML PUBLIC -//IETF//DTD HTML 2.0//EN>
1                                                                                                                                       <html><head>
2                                                                                                                           <title>302 Found</title>
3                                                                                                                                      </head><body>
4                                                                                                                                     <h1>Found</h1>
6                                                                                                                                     </body></html>
Error in getBM(attributes = c("ensembl_gene_id", "start_position", "end_position"),  : 
  The query to the BioMart webservice returned an invalid result: the number of columns in the result table does not equal the number of attributes in the query. Please report this to the mailing list.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.

--
Thomas Maurel
Bioinformatician - Ensembl Production Team
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD
United Kingdom

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.