[biomart-users] cannot retrieve mart list

classic Classic list List threaded Threaded
5 messages Options
Reply | Threaded
Open this post in threaded view
|

[biomart-users] cannot retrieve mart list

Julia Romanowska
Hi,
I'm new in using biomaRt and an advanced R user. I have problems retrieving list of marts from any other host than the default.

> listMarts( host = "biomart.gsc.riken.jp", verbose = TRUE )
Attempting web service request:
http
://biomart.gsc.riken.jp:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "hapmart.hapmap.org/BioMart/martview", verbose = TRUE )
Attempting web service request:
http
://hapmart.hapmap.org/BioMart/martview:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "www.biomart.org", verbose = TRUE )
Attempting web service request:
http
://www.biomart.org:80/biomart/martservice?type=registry&requestid=biomaRt
Space required after the Public Identifier
SystemLiteral " or ' expected
SYSTEM or PUBLIC, the URI is missing
Opening and ending tag mismatch: hr line 7 and body
Opening and ending tag mismatch: body line 4 and html
Premature end of data in tag html line 2

> listMarts()
               biomart               version
1 ENSEMBL_MART_ENSEMBL      Ensembl Genes 85
2     ENSEMBL_MART_SNP  Ensembl Variation 85
3 ENSEMBL_MART_FUNCGEN Ensembl Regulation 85
4    ENSEMBL_MART_VEGA               Vega 65


I am specifically interested in the FANTOM5 database (http://fantom.gsc.riken.jp/).
I would be grateful for any help!

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.
Reply | Threaded
Open this post in threaded view
|

Re: [biomart-users] cannot retrieve mart list

Arek Kasprzyk
Hi Julia,

As far as I know biomaRt only interfaces BioMart 0.7 instances. The Phantom resource is version 0.9. I don't think you will be able to use biomaRt to access it 


a.

On 6 September 2016 at 08:36, Julia Romanowska <[hidden email]> wrote:
Hi,
I'm new in using biomaRt and an advanced R user. I have problems retrieving list of marts from any other host than the default.

> listMarts( host = "biomart.gsc.riken.jp", verbose = TRUE )
Attempting web service request:
http
://biomart.gsc.riken.jp:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "hapmart.hapmap.org/BioMart/martview", verbose = TRUE )
Attempting web service request:
http
://hapmart.hapmap.org/BioMart/martview:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "www.biomart.org", verbose = TRUE )
Attempting web service request:
http
://www.biomart.org:80/biomart/martservice?type=registry&requestid=biomaRt
Space required after the Public Identifier
SystemLiteral " or ' expected
SYSTEM or PUBLIC, the URI is missing
Opening and ending tag mismatch: hr line 7 and body
Opening and ending tag mismatch: body line 4 and html
Premature end of data in tag html line 2

> listMarts()
               biomart               version
1 ENSEMBL_MART_ENSEMBL      Ensembl Genes 85
2     ENSEMBL_MART_SNP  Ensembl Variation 85
3 ENSEMBL_MART_FUNCGEN Ensembl Regulation 85
4    ENSEMBL_MART_VEGA               Vega 65


I am specifically interested in the FANTOM5 database (http://fantom.gsc.riken.jp/).
I would be grateful for any help!

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.
Reply | Threaded
Open this post in threaded view
|

Re: [biomart-users] cannot retrieve mart list

Julia Romanowska
Thanks for the explanation. Is there a big change between BioMart 0.7 and 0.9? Is it planned to include reading from Biomart 0.9 instances in the R package?


On Tuesday, October 18, 2016 at 3:18:45 PM UTC+2, Arek Kasprzyk wrote:
Hi Julia,

As far as I know biomaRt only interfaces BioMart 0.7 instances. The Phantom resource is version 0.9. I don't think you will be able to use biomaRt to access it 


a.

On 6 September 2016 at 08:36, Julia Romanowska <<a href="javascript:" target="_blank" gdf-obfuscated-mailto="Kxz1fvgoBAAJ" rel="nofollow" onmousedown="this.href=&#39;javascript:&#39;;return true;" onclick="this.href=&#39;javascript:&#39;;return true;">romano...@...> wrote:
Hi,
I'm new in using biomaRt and an advanced R user. I have problems retrieving list of marts from any other host than the default.

> listMarts( host = "<a href="http://biomart.gsc.riken.jp" target="_blank" rel="nofollow" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNF19S1OKw7kyECBhTPFUXX-Re4BOA&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNF19S1OKw7kyECBhTPFUXX-Re4BOA&#39;;return true;">biomart.gsc.riken.jp", verbose = TRUE )
Attempting web service request:
http
://<a href="http://biomart.gsc.riken.jp:80/biomart/martservice?type=registry&amp;requestid=biomaRt" target="_blank" rel="nofollow" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNE6ph1-ScYMYnrqm-hS15swFI9Xgw&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNE6ph1-ScYMYnrqm-hS15swFI9Xgw&#39;;return true;">biomart.gsc.riken.jp:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "<a href="http://hapmart.hapmap.org/BioMart/martview" target="_blank" rel="nofollow" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNHbEyq7_GpUZY9AeC5IJrWNpCRHfA&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNHbEyq7_GpUZY9AeC5IJrWNpCRHfA&#39;;return true;">hapmart.hapmap.org/BioMart/martview", verbose = TRUE )
Attempting web service request:
http
://<a href="http://hapmart.hapmap.org/BioMart/martview:80/biomart/martservice?type=registry&amp;requestid=biomaRt" target="_blank" rel="nofollow" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNH-gzCk2FnpxBOm5rrRZ86mFmSBnw&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNH-gzCk2FnpxBOm5rrRZ86mFmSBnw&#39;;return true;">hapmart.hapmap.org/BioMart/martview:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "<a href="http://www.biomart.org" target="_blank" rel="nofollow" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGTycqpJiNkOBMw43z-5DeV4RRH3w&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGTycqpJiNkOBMw43z-5DeV4RRH3w&#39;;return true;">www.biomart.org", verbose = TRUE )
Attempting web service request:
http
://<a href="http://www.biomart.org:80/biomart/martservice?type=registry&amp;requestid=biomaRt" target="_blank" rel="nofollow" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGX61d_3x6VmUf19G7LBFqaip8icg&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGX61d_3x6VmUf19G7LBFqaip8icg&#39;;return true;">www.biomart.org:80/biomart/martservice?type=registry&requestid=biomaRt
Space required after the Public Identifier
SystemLiteral " or ' expected
SYSTEM or PUBLIC, the URI is missing
Opening and ending tag mismatch: hr line 7 and body
Opening and ending tag mismatch: body line 4 and html
Premature end of data in tag html line 2

> listMarts()
               biomart               version
1 ENSEMBL_MART_ENSEMBL      Ensembl Genes 85
2     ENSEMBL_MART_SNP  Ensembl Variation 85
3 ENSEMBL_MART_FUNCGEN Ensembl Regulation 85
4    ENSEMBL_MART_VEGA               Vega 65


I am specifically interested in the FANTOM5 database (<a href="http://fantom.gsc.riken.jp/" target="_blank" rel="nofollow" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Ffantom.gsc.riken.jp%2F\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNEPZjVaQXeZd-CWvT-ujvLRaI0BIA&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Ffantom.gsc.riken.jp%2F\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNEPZjVaQXeZd-CWvT-ujvLRaI0BIA&#39;;return true;">http://fantom.gsc.riken.jp/).
I would be grateful for any help!

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to <a href="javascript:" target="_blank" gdf-obfuscated-mailto="Kxz1fvgoBAAJ" rel="nofollow" onmousedown="this.href=&#39;javascript:&#39;;return true;" onclick="this.href=&#39;javascript:&#39;;return true;">biomart-user...@googlegroups.com.
Visit this group at <a href="https://groups.google.com/group/biomart-users" target="_blank" rel="nofollow" onmousedown="this.href=&#39;https://groups.google.com/group/biomart-users&#39;;return true;" onclick="this.href=&#39;https://groups.google.com/group/biomart-users&#39;;return true;">https://groups.google.com/group/biomart-users.
For more options, visit <a href="https://groups.google.com/d/optout" target="_blank" rel="nofollow" onmousedown="this.href=&#39;https://groups.google.com/d/optout&#39;;return true;" onclick="this.href=&#39;https://groups.google.com/d/optout&#39;;return true;">https://groups.google.com/d/optout.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.
Reply | Threaded
Open this post in threaded view
|

Re: [biomart-users] cannot retrieve mart list

Arek Kasprzyk
Hi Julia,

the short answer to your questions is 'yes' and 'yes'. However, I can't give you an exact time line for the latter just yet.

a.

On 18 October 2016 at 19:00, Julia Romanowska <[hidden email]> wrote:
Thanks for the explanation. Is there a big change between BioMart 0.7 and 0.9? Is it planned to include reading from Biomart 0.9 instances in the R package?


On Tuesday, October 18, 2016 at 3:18:45 PM UTC+2, Arek Kasprzyk wrote:
Hi Julia,

As far as I know biomaRt only interfaces BioMart 0.7 instances. The Phantom resource is version 0.9. I don't think you will be able to use biomaRt to access it 


a.

On 6 September 2016 at 08:36, Julia Romanowska <[hidden email]> wrote:
Hi,
I'm new in using biomaRt and an advanced R user. I have problems retrieving list of marts from any other host than the default.

> listMarts( host = "biomart.gsc.riken.jp", verbose = TRUE )
Attempting web service request:
http
://biomart.gsc.riken.jp:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "hapmart.hapmap.org/BioMart/martview", verbose = TRUE )
Attempting web service request:
http
://hapmart.hapmap.org/BioMart/martview:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "www.biomart.org", verbose = TRUE )
Attempting web service request:
http
://www.biomart.org:80/biomart/martservice?type=registry&requestid=biomaRt
Space required after the Public Identifier
SystemLiteral " or ' expected
SYSTEM or PUBLIC, the URI is missing
Opening and ending tag mismatch: hr line 7 and body
Opening and ending tag mismatch: body line 4 and html
Premature end of data in tag html line 2

> listMarts()
               biomart               version
1 ENSEMBL_MART_ENSEMBL      Ensembl Genes 85
2     ENSEMBL_MART_SNP  Ensembl Variation 85
3 ENSEMBL_MART_FUNCGEN Ensembl Regulation 85
4    ENSEMBL_MART_VEGA               Vega 65


I am specifically interested in the FANTOM5 database (http://fantom.gsc.riken.jp/).
I would be grateful for any help!

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to biomart-user...@googlegroups.com.
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.
Reply | Threaded
Open this post in threaded view
|

Re: [biomart-users] cannot retrieve mart list

Julia Romanowska
Ok, good to hear that biomaRt is being improved. Thanks!


On Wednesday, October 19, 2016 at 11:30:49 AM UTC+2, Arek Kasprzyk wrote:
Hi Julia,

the short answer to your questions is 'yes' and 'yes'. However, I can't give you an exact time line for the latter just yet.

a.

On 18 October 2016 at 19:00, Julia Romanowska <<a href="javascript:" target="_blank" gdf-obfuscated-mailto="N1W_xhxrBAAJ" rel="nofollow" onmousedown="this.href=&#39;javascript:&#39;;return true;" onclick="this.href=&#39;javascript:&#39;;return true;">romano...@...> wrote:
Thanks for the explanation. Is there a big change between BioMart 0.7 and 0.9? Is it planned to include reading from Biomart 0.9 instances in the R package?


On Tuesday, October 18, 2016 at 3:18:45 PM UTC+2, Arek Kasprzyk wrote:
Hi Julia,

As far as I know biomaRt only interfaces BioMart 0.7 instances. The Phantom resource is version 0.9. I don't think you will be able to use biomaRt to access it 


a.

On 6 September 2016 at 08:36, Julia Romanowska <[hidden email]> wrote:
Hi,
I'm new in using biomaRt and an advanced R user. I have problems retrieving list of marts from any other host than the default.

> listMarts( host = "<a href="http://biomart.gsc.riken.jp" rel="nofollow" target="_blank" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNF19S1OKw7kyECBhTPFUXX-Re4BOA&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNF19S1OKw7kyECBhTPFUXX-Re4BOA&#39;;return true;">biomart.gsc.riken.jp", verbose = TRUE )
Attempting web service request:
http
://<a href="http://biomart.gsc.riken.jp:80/biomart/martservice?type=registry&amp;requestid=biomaRt" rel="nofollow" target="_blank" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNE6ph1-ScYMYnrqm-hS15swFI9Xgw&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fbiomart.gsc.riken.jp%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNE6ph1-ScYMYnrqm-hS15swFI9Xgw&#39;;return true;">biomart.gsc.riken.jp:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "<a href="http://hapmart.hapmap.org/BioMart/martview" rel="nofollow" target="_blank" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNHbEyq7_GpUZY9AeC5IJrWNpCRHfA&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNHbEyq7_GpUZY9AeC5IJrWNpCRHfA&#39;;return true;">hapmart.hapmap.org/BioMart/martview", verbose = TRUE )
Attempting web service request:
http
://<a href="http://hapmart.hapmap.org/BioMart/martview:80/biomart/martservice?type=registry&amp;requestid=biomaRt" rel="nofollow" target="_blank" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNH-gzCk2FnpxBOm5rrRZ86mFmSBnw&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fhapmart.hapmap.org%2FBioMart%2Fmartview%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNH-gzCk2FnpxBOm5rrRZ86mFmSBnw&#39;;return true;">hapmart.hapmap.org/BioMart/martview:80/biomart/martservice?type=registry&requestid=biomaRt
[1] biomart version
<0 rows> (or 0-length row.names)

> listMarts( host = "<a href="http://www.biomart.org" rel="nofollow" target="_blank" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGTycqpJiNkOBMw43z-5DeV4RRH3w&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGTycqpJiNkOBMw43z-5DeV4RRH3w&#39;;return true;">www.biomart.org", verbose = TRUE )
Attempting web service request:
http
://<a href="http://www.biomart.org:80/biomart/martservice?type=registry&amp;requestid=biomaRt" rel="nofollow" target="_blank" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGX61d_3x6VmUf19G7LBFqaip8icg&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Fwww.biomart.org%3A80%2Fbiomart%2Fmartservice%3Ftype%3Dregistry%26requestid%3DbiomaRt\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNGX61d_3x6VmUf19G7LBFqaip8icg&#39;;return true;">www.biomart.org:80/biomart/martservice?type=registry&requestid=biomaRt
Space required after the Public Identifier
SystemLiteral " or ' expected
SYSTEM or PUBLIC, the URI is missing
Opening and ending tag mismatch: hr line 7 and body
Opening and ending tag mismatch: body line 4 and html
Premature end of data in tag html line 2

> listMarts()
               biomart               version
1 ENSEMBL_MART_ENSEMBL      Ensembl Genes 85
2     ENSEMBL_MART_SNP  Ensembl Variation 85
3 ENSEMBL_MART_FUNCGEN Ensembl Regulation 85
4    ENSEMBL_MART_VEGA               Vega 65


I am specifically interested in the FANTOM5 database (<a href="http://fantom.gsc.riken.jp/" rel="nofollow" target="_blank" onmousedown="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Ffantom.gsc.riken.jp%2F\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNEPZjVaQXeZd-CWvT-ujvLRaI0BIA&#39;;return true;" onclick="this.href=&#39;http://www.google.com/url?q\x3dhttp%3A%2F%2Ffantom.gsc.riken.jp%2F\x26sa\x3dD\x26sntz\x3d1\x26usg\x3dAFQjCNEPZjVaQXeZd-CWvT-ujvLRaI0BIA&#39;;return true;">http://fantom.gsc.riken.jp/).
I would be grateful for any help!

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to biomart-user...@googlegroups.com.
Visit this group at <a href="https://groups.google.com/group/biomart-users" rel="nofollow" target="_blank" onmousedown="this.href=&#39;https://groups.google.com/group/biomart-users&#39;;return true;" onclick="this.href=&#39;https://groups.google.com/group/biomart-users&#39;;return true;">https://groups.google.com/group/biomart-users.
For more options, visit <a href="https://groups.google.com/d/optout" rel="nofollow" target="_blank" onmousedown="this.href=&#39;https://groups.google.com/d/optout&#39;;return true;" onclick="this.href=&#39;https://groups.google.com/d/optout&#39;;return true;">https://groups.google.com/d/optout.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to <a href="javascript:" target="_blank" gdf-obfuscated-mailto="N1W_xhxrBAAJ" rel="nofollow" onmousedown="this.href=&#39;javascript:&#39;;return true;" onclick="this.href=&#39;javascript:&#39;;return true;">biomart-user...@googlegroups.com.
Visit this group at <a href="https://groups.google.com/group/biomart-users" target="_blank" rel="nofollow" onmousedown="this.href=&#39;https://groups.google.com/group/biomart-users&#39;;return true;" onclick="this.href=&#39;https://groups.google.com/group/biomart-users&#39;;return true;">https://groups.google.com/group/biomart-users.
For more options, visit <a href="https://groups.google.com/d/optout" target="_blank" rel="nofollow" onmousedown="this.href=&#39;https://groups.google.com/d/optout&#39;;return true;" onclick="this.href=&#39;https://groups.google.com/d/optout&#39;;return true;">https://groups.google.com/d/optout.

--
You received this message because you are subscribed to the Google Groups "biomart-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to [hidden email].
Visit this group at https://groups.google.com/group/biomart-users.
For more options, visit https://groups.google.com/d/optout.