[biomart-users] getBM timeout when querying SNPs for gene_id

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[biomart-users] getBM timeout when querying SNPs for gene_id


I just cross-posted on biostars, but realized I should've asked here first: https://www.biostars.org/p/343097.

Bottom line: I get a timeout when running biomaRt::getBM(c("refsnp_id", "ensembl_gene_stable_id"), "ensembl_gene", ensembl_gene_ids, snp_mart), even when ensembl_gene_ids only contains a single ID.

What could I be doing wrong?


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