for users running against Apollo master having trouble with installation / perl scripts
FYI, I ran into a series of issues running Apollo master (users of 2.0.8 or earlier need not worry) when doing a clean-all with the newest jbrowse that affects the ability to run the perl scripts in the tools/data directory on a Mac. This may affect the jbrowse installation.
If you run into this problem, then:
- pull the most recent version of Apollo (currently at #d50dcf5),
- ./apollo clean-all and deploy as you normally would.
Let us know if you run into any issues.
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