I posted the following issue to the github page:
https://github.com/GMOD/jbrowse/issues/659 and was instructed by Nathan to send an e-mail to you all to see if something like this was possible.
I’d like to make use of what’s already built for Apollo, namely getting sequences from features, but doing so within JBrowse itself. Reasons are mentioned in the thread. Please let me know what you think.
Student Services Contractor at
Mid-Continent Ecology Division