Hi Tony,
You can export blast results (in XML), InterPro results (in XML)
and GO annotations in GAF format directly from blast2GO. You will
need to use the GO, Blast and InterPro extension modules to load
each of those. If you are using the development code you'll have
problems loading blast as that module is currently being rewritten
to use less memory and load faster. If you have the blast module
code from 6 months ago it should work.
Stephen
On 11/14/2012 11:40 AM, Tony Power wrote:
Hi all,
I have annotated my contigs using blast2go.
My contigs are already on Tripal.
What should be the right format to which I should export the
annotations in order to import them to Tripal?
Thanks,
Tony
------------------------------------------------------------------------------
Monitor your physical, virtual and cloud infrastructure from a single
web console. Get in-depth insight into apps, servers, databases, vmware,
SAP, cloud infrastructure, etc. Download 30-day Free Trial.
Pricing starts from $795 for 25 servers or applications!
http://p.sf.net/sfu/zoho_dev2dev_nov
_______________________________________________
Gmod-tripal mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-tripal
------------------------------------------------------------------------------
Monitor your physical, virtual and cloud infrastructure from a single
web console. Get in-depth insight into apps, servers, databases, vmware,
SAP, cloud infrastructure, etc. Download 30-day Free Trial.
Pricing starts from $795 for 25 servers or applications!
http://p.sf.net/sfu/zoho_dev2dev_nov_______________________________________________
Gmod-tripal mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/gmod-tripal