Hi Kalpana,
We've added this to the back-end code, chromosome sequences are
implemented as CLOBs in the database but we haven't yet added anything
to the webapp or query system to take advantage of it. It will be done
some time and would be a really valuable feature to have.
Richard.
On 22/11/2011 19:25, Kalpana Karra wrote:
>
>> I was wondering if we can obtain the sequence of a chromosome from
>> coordinates x through Y? I think not, but just wanted to confirm.
>>
>> Similary, for a give gene can we obtain the sequence with a +/- x bp on
>> either side?
>>
>> It would require slicing the chromosome sequence based on coordinates, is
>> that possible in Intermine? any plans to implement such a thing?
>>
>> Thanks,
>> -Kalpana
>
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