Carson Holt-2
Carson Holt-2
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Posts in GMOD
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Date Subject Count Location
Re: Ask for help about the collapse of Maker (version 2.31.9) when annotated with Fgenesh 0 replies MAKER
Re: Annotation of a new variant within a species 0 replies MAKER
Re: Few alternative isoforms when alt_splice=0 0 replies MAKER
Re: How sensitive is MAKER to redundant/partial transcripts? 2 replies MAKER
Re: Maker Error : Thread 1 terminated abnormally.. André Machado <andremmachado25@gmail.com> AttachmentsJun 26 (8 days ago) to maker-devel Hi , First of all thanks for your efforts in Maker pipeline. Its a tremendous help for the people that works with genomes. In the last 4 days i have broke my head.. with an error .. but still without a solution. I found this old thread: https://groups.google.com/forum/#!msg/maker-devel/X2-76BH9gvg/rU4kLJ3B6tsJ Seems to be a quite similar... but don't point to a specific solution. I have run maker with the data test and all runned ok. Maker finalize the entire process without errors. Recently, i’m trying to aplly my own data on MPI cluster. But this error, frequently occurred. Thread 1 terminated abnormally: ../dna.maker.output/mpi_blastdb/dna%2Efa.mpi.1/dna%2Efa.mpi.1.0 --> rank=8, hostname=compute-0-1.local, at ../Analysis/Geno/maker/bin/maker line 1451 thread 1. --> rank=8, hostname=compute-0-1.local deleted:0 hits deleted:0 hits preparing ab-ini 0 replies MAKER
Re: Maker Error : Thread 1 terminated abnormally.. 0 replies MAKER
Re: [CAUTION: Suspicious Link] map_forward=1 not mapping reference ID's to output correctly 0 replies MAKER
Re: How sensitive is MAKER to redundant/partial transcripts? 0 replies MAKER
Re: Filtering gene models based on eAED scores 0 replies MAKER
Re: Filtering gene models based on eAED scores 2 replies MAKER
Re: Transcript & protein fasta sequence id/name collisions 1 reply MAKER
Re: Merge warning = 1 0 replies MAKER
Re: largest genome annotated? 0 replies MAKER
Re: largest genome annotated? 1 reply MAKER
Re: how to input a masked assembly for annotation into Maker 0 replies MAKER
Re: Building MAKER with specific perl version 0 replies MAKER
Re: large UTR overhang 0 replies MAKER
Re: databases supported with ipr_update_gff script 0 replies MAKER
Re: keep_preds=0 but some gene models have anyway an AED equal to 1. 0 replies MAKER
Re: MAKER v3 ERROR: Failed while processing all repeats 1 reply MAKER
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